Analysis of interatomic Contacts of Structural Units in PDB entry:
4M6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M6H entry

There are 2 chains in PDB entry 4M6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 24GLN 237
B
 ASN 23GLN 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4M6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 88Right-handed alpha
Helix 2
2
A
105 117Right-handed alpha
Helix 3
3
A
146 151Right-handed alpha
Helix 4
4
A
151 167Right-handed alpha
Helix 5
5
A
186 191Right-handed alpha
Helix 6
6
A
206 214Right-handed alpha
Helix 7
7
A
215 237Right-handed alpha
Helix 8
8
B
73 88Right-handed alpha
Helix 9
9
B
113 117Right-handed alpha
Helix 10
10
B
146 151Right-handed alpha
Helix 11
11
B
151 167Right-handed alpha
Helix 12
12
B
186 191Right-handed alpha
Helix 13
13
B
206 214Right-handed alpha
Helix 14
14
B
215 237Right-handed alpha
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There are 2 sheets in PDB entry 4M6H. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 94first strand
Strand 2
A
28 33parallel
Strand 3
A
120 127parallel
Strand 4
A
196 203parallel
Strand 5
A
137 141anti-parallel
Strand 6
A
180 183parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 94first strand
Strand 2
B
28 33parallel
Strand 3
B
120 127parallel
Strand 4
B
196 203parallel
Strand 5
B
137 141anti-parallel
Strand 6
B
180 183parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il