Analysis of interatomic Contacts of Structural Units in PDB entry:
4M7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M7E entry

There are 4 chains in PDB entry 4M7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 34PRO 766
B
 GLN 30CYS 763
D
 ASN 26THR 200
C
 ASN 26THR 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 4M7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 44Right-handed alpha
Helix 2
2
A
60 64Right-handed 310
Helix 3
3
A
87 95Right-handed alpha
Helix 4
4
A
137 147Right-handed 310
Helix 5
5
A
189 195Right-handed alpha
Helix 6
6
A
261 266Right-handed alpha
Helix 7
7
A
308 317Right-handed 310
Helix 8
8
A
333 338Right-handed 310
Helix 9
9
A
357 362Right-handed alpha
Helix 10
10
A
382 386Right-handed 310
Helix 11
11
A
387 392Right-handed alpha
Helix 12
12
A
433 439Right-handed 310
Helix 13
13
A
457 463Right-handed 310
Helix 14
14
A
481 487Right-handed 310
Helix 15
15
A
505 511Right-handed 310
Helix 16
16
A
531 535Right-handed 310
Helix 17
17
A
553 559Right-handed 310
Helix 18
18
A
578 582Right-handed 310
Helix 19
19
A
625 630Right-handed 310
Helix 20
20
A
671 676Right-handed 310
Helix 21
21
A
695 701Right-handed 310
Helix 22
22
A
719 725Right-handed 310
Helix 23
23
A
746 751Right-handed 310
Helix 24
24
A
752 757Right-handed 310
Helix 25
25
B
31 46Right-handed alpha
Helix 26
26
B
60 64Right-handed 310
Helix 27
27
B
87 95Right-handed alpha
Helix 28
28
B
137 147Right-handed 310
Helix 29
29
B
189 195Right-handed alpha
Helix 30
30
B
260 266Right-handed alpha
Helix 31
31
B
333 338Right-handed 310
Helix 32
32
B
357 362Right-handed alpha
Helix 33
33
B
382 386Right-handed 310
Helix 34
34
B
387 392Right-handed alpha
Helix 35
35
B
433 439Right-handed 310
Helix 36
36
B
457 463Right-handed 310
Helix 37
37
B
481 487Right-handed 310
Helix 38
38
B
505 511Right-handed 310
Helix 39
39
B
531 535Right-handed 310
Helix 40
40
B
553 559Right-handed 310
Helix 41
41
B
578 582Right-handed 310
Helix 42
42
B
622 630Right-handed 310
Helix 43
43
B
671 676Right-handed 310
Helix 44
44
B
695 701Right-handed 310
Helix 45
45
B
719 725Right-handed 310
Helix 46
46
B
752 757Right-handed 310
Helix 47
47
D
27 38Right-handed alpha
Helix 48
48
D
45 49Right-handed 310
Helix 49
49
D
55 59Right-handed 310
Helix 50
50
D
85 91Right-handed 310
Helix 51
51
D
109 113Right-handed 310
Helix 52
52
D
133 139Right-handed 310
Helix 53
53
D
184 189Right-handed 310
Helix 54
54
D
190 194Right-handed 310
Helix 55
55
C
27 38Right-handed alpha
Helix 56
56
C
85 91Right-handed 310
Helix 57
57
C
109 115Right-handed 310
Helix 58
58
C
133 139Right-handed 310
Helix 59
59
C
184 189Right-handed 310
Helix 60
60
C
190 194Right-handed 310
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There are 14 sheets in PDB entry 4M7E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 26 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
74 78anti-parallel
Strand 3
A
103 105parallel
Strand 4
A
126 128parallel
Strand 5
A
152 154parallel
Strand 6
A
177 179parallel
Strand 7
A
204 206parallel
Strand 8
A
226 228parallel
Strand 9
A
249 251parallel
Strand 10
A
273 275parallel
Strand 11
A
295 297parallel
Strand 12
A
320 322parallel
Strand 13
A
344 346parallel
Strand 14
A
369 371parallel
Strand 15
A
394 396parallel
Strand 16
A
420 422parallel
Strand 17
A
444 446parallel
Strand 18
A
469 470parallel
Strand 19
A
492 494parallel
Strand 20
A
516 518parallel
Strand 21
A
540 542parallel
Strand 22
A
564 566parallel
Strand 23
A
658 660parallel
Strand 24
A
682 684parallel
Strand 25
A
706 708parallel
Strand 26
A
730 732parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 283first strand
Strand 2
A
302 306parallel
Strand 3
A
327 330parallel
Strand 4
A
351 355parallel
Strand 5
A
376 378parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
427 428parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 550first strand
Strand 2
A
571 572parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 617first strand
Strand 2
A
596 601anti-parallel
Strand 3
A
641 645anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 668first strand
Strand 2
A
689 692parallel
Strand 3
A
713 716parallel
Strand 4
A
737 740parallel
Strand 5
A
761 762parallel
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There are 26 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
74 78anti-parallel
Strand 3
B
103 105parallel
Strand 4
B
126 128parallel
Strand 5
B
152 154parallel
Strand 6
B
177 179parallel
Strand 7
B
204 206parallel
Strand 8
B
226 228parallel
Strand 9
B
249 251parallel
Strand 10
B
273 275parallel
Strand 11
B
295 297parallel
Strand 12
B
320 322parallel
Strand 13
B
344 346parallel
Strand 14
B
369 371parallel
Strand 15
B
394 396parallel
Strand 16
B
420 422parallel
Strand 17
B
444 446parallel
Strand 18
B
469 470parallel
Strand 19
B
492 494parallel
Strand 20
B
516 518parallel
Strand 21
B
540 542parallel
Strand 22
B
564 566parallel
Strand 23
B
658 660parallel
Strand 24
B
682 684parallel
Strand 25
B
706 708parallel
Strand 26
B
730 732parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
282 283first strand
Strand 2
B
302 306parallel
Strand 3
B
327 330parallel
Strand 4
B
351 354parallel
Strand 5
B
376 377parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
613 617first strand
Strand 2
B
596 601anti-parallel
Strand 3
B
641 645anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
667 668first strand
Strand 2
B
689 692parallel
Strand 3
B
713 716parallel
Strand 4
B
737 740parallel
Strand 5
B
761 762parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 40first strand
Strand 2
D
81 83anti-parallel
Strand 3
D
103 105parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 64first strand
Strand 2
D
70 74anti-parallel
Strand 3
D
96 98parallel
Strand 4
D
120 122parallel
Strand 5
D
144 146parallel
Strand 6
D
168 169parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 40first strand
Strand 2
C
81 83anti-parallel
Strand 3
C
103 105parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 64first strand
Strand 2
C
70 74anti-parallel
Strand 3
C
96 98parallel
Strand 4
C
120 122parallel
Strand 5
C
144 146parallel
Strand 6
C
168 169parallel
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