Analysis of interatomic Contacts of Structural Units in PDB entry:
4M7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M7O entry

There is 1 chain in PDB entry 4M7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 37LYS 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4M7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 56Right-handed alpha
Helix 2
2
A
58 60Right-handed 310
Helix 3
3
A
88 95Right-handed alpha
Helix 4
4
A
105 107Right-handed 310
Helix 5
5
A
110 120Right-handed alpha
Helix 6
6
A
132 147Right-handed alpha
Helix 7
7
A
149 170Right-handed alpha
Helix 8
8
A
197 206Right-handed alpha
Helix 9
9
A
222 230Right-handed alpha
Helix 10
10
A
241 252Right-handed alpha
Helix 11
11
A
254 257Right-handed 310
Helix 12
12
A
258 263Right-handed alpha
Helix 13
13
A
270 275Right-handed alpha
Helix 14
14
A
280 293Right-handed alpha
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There are 3 sheets in PDB entry 4M7O. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
A
62 66parallel
Strand 3
A
42 44parallel
Strand 4
A
99 103parallel
Strand 5
A
123 127parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
179 185parallel
Strand 3
A
191 193anti-parallel
Strand 4
A
218 220anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
179 185parallel
Strand 3
A
233 236parallel
Strand 4
A
266 268parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il