Analysis of interatomic Contacts of Structural Units in PDB entry:
4M7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M7X entry

There is 1 chain in PDB entry 4M7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4M7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 41Right-handed alpha
Helix 2
2
A
53 60Right-handed alpha
Helix 3
3
A
69 85Right-handed alpha
Helix 4
4
A
120 133Right-handed alpha
Helix 5
5
A
136 145Right-handed alpha
Helix 6
6
A
156 161Right-handed alpha
Helix 7
7
A
178 182Right-handed 310
Helix 8
8
A
188 216Right-handed alpha
Helix 9
9
A
224 228Right-handed 310
Helix 10
10
A
230 244Right-handed alpha
Helix 11
11
A
253 255Right-handed 310
Helix 12
12
A
256 270Right-handed alpha
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There are 3 sheets in PDB entry 4M7X. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 28first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
2 7anti-parallel
Strand 4
A
47 50parallel
Strand 5
A
65 67parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 117first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
92 97anti-parallel
Strand 4
A
219 223parallel
Strand 5
A
247 250parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
172 174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il