Analysis of interatomic Contacts of Structural Units in PDB entry:
4M97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M97 entry

There is 1 chain in PDB entry 4M97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 42ASN 506
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 4M97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed alpha
Helix 2
2
A
91 104Right-handed alpha
Helix 3
3
A
134 140Right-handed alpha
Helix 4
4
A
146 167Right-handed alpha
Helix 5
5
A
175 177Right-handed 310
Helix 6
6
A
206 211Right-handed alpha
Helix 7
7
A
212 217Right-handed alpha
Helix 8
8
A
218 224Right-handed alpha
Helix 9
9
A
229 245Right-handed alpha
Helix 10
10
A
253 264Right-handed alpha
Helix 11
11
A
270 276Right-handed 310
Helix 12
12
A
277 288Right-handed alpha
Helix 13
13
A
291 295Right-handed 310
Helix 14
14
A
297 304Right-handed alpha
Helix 15
15
A
304 311Right-handed alpha
Helix 16
16
A
322 352Right-handed alpha
Helix 17
17
A
352 367Right-handed alpha
Helix 18
18
A
375 389Right-handed alpha
Helix 19
19
A
397 414Right-handed alpha
Helix 20
20
A
423 450Right-handed alpha
Helix 21
21
A
459 470Right-handed alpha
Helix 22
22
A
472 484Right-handed alpha
Helix 23
23
A
492 503Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4M97. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 59first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
75 82anti-parallel
Strand 4
A
122 127anti-parallel
Strand 5
A
113 118anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 181first strand
Strand 2
A
190 192anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
421 422anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
490 491anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il