Analysis of interatomic Contacts of Structural Units in PDB entry:
4MCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MCC entry

There are 2 chains in PDB entry 4MCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 219
B
 MET 1ASN 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4MCC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 12Right-handed 310
Helix 2
2
A
13 18Right-handed alpha
Helix 3
3
A
19 28Right-handed alpha
Helix 4
4
A
37 42Right-handed 310
Helix 5
5
A
63 79Right-handed alpha
Helix 6
6
A
95 103Right-handed alpha
Helix 7
7
A
119 127Right-handed alpha
Helix 8
8
A
141 154Right-handed alpha
Helix 9
9
A
193 197Right-handed 310
Helix 10
10
A
201 203Right-handed 310
Helix 11
11
A
204 218Right-handed alpha
Helix 12
12
B
9 12Right-handed 310
Helix 13
13
B
13 18Right-handed alpha
Helix 14
14
B
19 28Right-handed alpha
Helix 15
15
B
37 42Right-handed 310
Helix 16
16
B
63 79Right-handed alpha
Helix 17
17
B
95 103Right-handed alpha
Helix 18
18
B
119 127Right-handed alpha
Helix 19
19
B
141 154Right-handed alpha
Helix 20
20
B
193 198Right-handed 310
Helix 21
21
B
200 220Right-handed alpha
Helix 22
22
B
221 226Right-handed alpha
Helix 23
23
B
230 244Right-handed alpha
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There are 6 sheets in PDB entry 4MCC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 36first strand
Strand 2
A
2 6parallel
Strand 3
A
107 112parallel
Strand 4
A
83 87parallel
Strand 5
A
129 132parallel
Strand 6
A
92 93parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
61 62anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
190 191anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 36first strand
Strand 2
B
2 6parallel
Strand 3
B
107 112parallel
Strand 4
B
83 87parallel
Strand 5
B
129 132parallel
Strand 6
B
92 93parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
61 62anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 187first strand
Strand 2
B
190 191anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il