Analysis of interatomic Contacts of Structural Units in PDB entry:
4MDU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MDU entry

There are 2 chains in PDB entry 4MDU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7TYR 363
B
 ILE 6GLN 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 4MDU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
37 49Right-handed alpha
Helix 3
3
A
55 64Right-handed alpha
Helix 4
4
A
67 83Right-handed alpha
Helix 5
5
A
85 94Right-handed alpha
Helix 6
6
A
95 106Right-handed alpha
Helix 7
7
A
108 123Right-handed alpha
Helix 8
8
A
127 136Right-handed alpha
Helix 9
9
A
139 157Right-handed alpha
Helix 10
10
A
165 170Right-handed alpha
Helix 11
11
A
172 175Right-handed 310
Helix 12
12
A
176 187Right-handed alpha
Helix 13
13
A
194 200Right-handed alpha
Helix 14
14
A
200 205Right-handed alpha
Helix 15
15
A
206 210Right-handed 310
Helix 16
16
A
211 225Right-handed alpha
Helix 17
17
A
235 242Right-handed alpha
Helix 18
18
A
245 261Right-handed alpha
Helix 19
19
A
263 272Right-handed alpha
Helix 20
20
A
273 289Right-handed alpha
Helix 21
21
A
289 302Right-handed alpha
Helix 22
22
A
305 309Right-handed 310
Helix 23
23
A
310 320Right-handed alpha
Helix 24
24
A
323 336Right-handed alpha
Helix 25
25
A
338 347Right-handed alpha
Helix 26
26
A
348 359Right-handed alpha
Helix 27
27
B
14 18Right-handed 310
Helix 28
28
B
37 50Right-handed alpha
Helix 29
29
B
55 64Right-handed alpha
Helix 30
30
B
67 83Right-handed alpha
Helix 31
31
B
85 94Right-handed alpha
Helix 32
32
B
95 107Right-handed alpha
Helix 33
33
B
108 123Right-handed alpha
Helix 34
34
B
127 137Right-handed alpha
Helix 35
35
B
139 157Right-handed alpha
Helix 36
36
B
165 170Right-handed alpha
Helix 37
37
B
172 175Right-handed 310
Helix 38
38
B
176 188Right-handed alpha
Helix 39
39
B
194 200Right-handed alpha
Helix 40
40
B
200 205Right-handed alpha
Helix 41
41
B
206 210Right-handed 310
Helix 42
42
B
211 225Right-handed alpha
Helix 43
43
B
235 244Right-handed alpha
Helix 44
44
B
245 261Right-handed alpha
Helix 45
45
B
263 272Right-handed alpha
Helix 46
46
B
273 289Right-handed alpha
Helix 47
47
B
289 302Right-handed alpha
Helix 48
48
B
305 309Right-handed 310
Helix 49
49
B
310 321Right-handed alpha
Helix 50
50
B
323 336Right-handed alpha
Helix 51
51
B
338 347Right-handed alpha
Helix 52
52
B
348 359Right-handed alpha
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There are no sheets in PDB entry 4MDU
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