Analysis of interatomic Contacts of Structural Units in PDB entry:
4MDV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MDV entry

There are 2 chains in PDB entry 4MDV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6ASN 364
B
 ILE 6TYR 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 4MDV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
37 49Right-handed alpha
Helix 3
3
A
55 64Right-handed alpha
Helix 4
4
A
67 82Right-handed alpha
Helix 5
5
A
85 94Right-handed alpha
Helix 6
6
A
95 107Right-handed alpha
Helix 7
7
A
108 122Right-handed alpha
Helix 8
8
A
127 137Right-handed alpha
Helix 9
9
A
139 157Right-handed alpha
Helix 10
10
A
165 174Right-handed alpha
Helix 11
11
A
175 187Right-handed alpha
Helix 12
12
A
194 200Right-handed alpha
Helix 13
13
A
200 205Right-handed alpha
Helix 14
14
A
206 210Right-handed 310
Helix 15
15
A
211 224Right-handed alpha
Helix 16
16
A
235 244Right-handed alpha
Helix 17
17
A
245 261Right-handed alpha
Helix 18
18
A
263 272Right-handed alpha
Helix 19
19
A
273 289Right-handed alpha
Helix 20
20
A
289 303Right-handed alpha
Helix 21
21
A
308 320Right-handed alpha
Helix 22
22
A
323 336Right-handed alpha
Helix 23
23
A
338 347Right-handed alpha
Helix 24
24
A
348 359Right-handed alpha
Helix 25
25
B
14 18Right-handed 310
Helix 26
26
B
37 49Right-handed alpha
Helix 27
27
B
55 64Right-handed alpha
Helix 28
28
B
67 82Right-handed alpha
Helix 29
29
B
85 94Right-handed alpha
Helix 30
30
B
95 107Right-handed alpha
Helix 31
31
B
108 122Right-handed alpha
Helix 32
32
B
127 136Right-handed alpha
Helix 33
33
B
139 157Right-handed alpha
Helix 34
34
B
165 174Right-handed alpha
Helix 35
35
B
175 187Right-handed alpha
Helix 36
36
B
194 200Right-handed alpha
Helix 37
37
B
200 205Right-handed alpha
Helix 38
38
B
206 210Right-handed 310
Helix 39
39
B
211 224Right-handed alpha
Helix 40
40
B
235 244Right-handed alpha
Helix 41
41
B
245 261Right-handed alpha
Helix 42
42
B
263 271Right-handed alpha
Helix 43
43
B
274 289Right-handed alpha
Helix 44
44
B
289 303Right-handed alpha
Helix 45
45
B
308 320Right-handed alpha
Helix 46
46
B
323 336Right-handed alpha
Helix 47
47
B
338 347Right-handed alpha
Helix 48
48
B
348 359Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4MDV.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
B
272 273parallel
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