Analysis of interatomic Contacts of Structural Units in PDB entry:
4MEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MEV entry

There is 1 chain in PDB entry 4MEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28LEU 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4MEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 62Right-handed alpha
Helix 2
2
A
78 80Right-handed 310
Helix 3
3
A
81 88Right-handed alpha
Helix 4
4
A
97 102Right-handed 310
Helix 5
5
A
105 112Right-handed 310
Helix 6
6
A
119 126Right-handed alpha
Helix 7
7
A
129 142Right-handed alpha
Helix 8
8
A
165 170Right-handed 310
Helix 9
9
A
178 188Right-handed alpha
Helix 10
10
A
196 198Right-handed 310
Helix 11
11
A
199 206Right-handed alpha
Helix 12
12
A
216 222Right-handed alpha
Helix 13
13
A
223 228Right-handed 310
Helix 14
14
A
250 256Right-handed alpha
Helix 15
15
A
257 293Right-handed alpha
Helix 16
16
A
301 315Right-handed alpha
Helix 17
17
A
315 322Right-handed alpha
Helix 18
18
A
324 336Right-handed alpha
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There are 3 sheets in PDB entry 4MEV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 71first strand
Strand 2
A
30 33parallel
Strand 3
A
93 95parallel
Strand 4
A
246 249anti-parallel
Strand 5
A
144 148anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
173 175parallel
Strand 3
A
211 215parallel
Strand 4
A
151 158anti-parallel
Strand 5
A
241 243anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
173 175parallel
Strand 3
A
211 215parallel
Strand 4
A
151 158anti-parallel
Strand 5
A
230 232anti-parallel
Strand 6
A
296 298parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il