Analysis of interatomic Contacts of Structural Units in PDB entry:
4MF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MF0 entry

There are 2 chains in PDB entry 4MF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 357GLY 619
B
 VAL 357GLY 619
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4MF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
399 413Right-handed alpha
Helix 2
2
A
443 449Right-handed alpha
Helix 3
3
A
455 476Right-handed alpha
Helix 4
4
A
492 494Right-handed 310
Helix 5
5
A
526 532Right-handed alpha
Helix 6
6
A
536 553Right-handed alpha
Helix 7
7
A
563 574Right-handed alpha
Helix 8
8
A
584 595Right-handed alpha
Helix 9
9
A
598 602Right-handed 310
Helix 10
10
A
604 618Right-handed alpha
Helix 11
11
B
399 412Right-handed alpha
Helix 12
12
B
442 450Right-handed alpha
Helix 13
13
B
455 476Right-handed alpha
Helix 14
14
B
484 486Right-handed 310
Helix 15
15
B
492 494Right-handed 310
Helix 16
16
B
521 525Right-handed 310
Helix 17
17
B
526 533Right-handed alpha
Helix 18
18
B
536 553Right-handed alpha
Helix 19
19
B
563 573Right-handed alpha
Helix 20
20
B
584 595Right-handed alpha
Helix 21
21
B
598 602Right-handed 310
Helix 22
22
B
604 619Right-handed alpha
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There are 4 sheets in PDB entry 4MF0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 368first strand
Strand 2
A
377 393anti-parallel
Strand 3
B
377 393anti-parallel
Strand 4
B
363 368anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 359first strand
Strand 2
A
421 425parallel
Strand 3
A
431 436anti-parallel
Strand 4
A
377 393anti-parallel
Strand 5
B
377 393anti-parallel
Strand 6
B
431 436anti-parallel
Strand 7
B
421 425anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 442first strand
Strand 2
A
489 490anti-parallel
Strand 3
A
496 497anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 490first strand
Strand 2
B
496 498anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il