Analysis of interatomic Contacts of Structural Units in PDB entry:
4MF5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MF5 entry

There is 1 chain in PDB entry 4MF5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -3GLY 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4MF5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 13Right-handed alpha
Helix 2
2
A
28 42Right-handed alpha
Helix 3
3
A
55 58Right-handed 310
Helix 4
4
A
59 64Right-handed alpha
Helix 5
5
A
79 83Right-handed 310
Helix 6
6
A
89 102Right-handed alpha
Helix 7
7
A
108 125Right-handed alpha
Helix 8
8
A
125 139Right-handed alpha
Helix 9
9
A
147 169Right-handed alpha
Helix 10
10
A
180 195Right-handed alpha
Helix 11
11
A
199 204Right-handed alpha
Helix 12
12
A
205 207Right-handed 310
Helix 13
13
A
208 221Right-handed alpha
Helix 14
14
A
221 229Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4MF5.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 49first strand
Strand 2
A
21 25parallel
Strand 3
A
73 76anti-parallel
Strand 4
A
85 88anti-parallel
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