Analysis of interatomic Contacts of Structural Units in PDB entry:
4MFG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MFG entry

There are 4 chains in PDB entry 4MFG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2TYR 165
B
 SER -2TYR 165
C
 SER -2TYR 165
D
 SER -2TYR 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4MFG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 9Right-handed alpha
Helix 2
2
A
142 163Right-handed alpha
Helix 3
3
B
-1 9Right-handed alpha
Helix 4
4
B
142 163Right-handed alpha
Helix 5
5
C
-1 9Right-handed alpha
Helix 6
6
C
142 163Right-handed alpha
Helix 7
7
D
-1 9Right-handed alpha
Helix 8
8
D
142 163Right-handed alpha
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There are 12 sheets in PDB entry 4MFG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
23 30parallel
Strand 3
A
41 51parallel
Strand 4
A
69 71parallel
Strand 5
A
87 88parallel
Strand 6
A
105 106parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
23 30parallel
Strand 3
A
41 51parallel
Strand 4
A
62 64parallel
Strand 5
A
82 84parallel
Strand 6
A
99 100parallel
Strand 7
A
117 118parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
35 36parallel
Strand 3
A
56 57parallel
Strand 4
A
76 77parallel
Strand 5
A
92 94parallel
Strand 6
A
110 112parallel
Strand 7
A
128 131parallel
Strand 8
A
136 140anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
23 30parallel
Strand 3
B
41 51parallel
Strand 4
B
62 64parallel
Strand 5
B
82 84parallel
Strand 6
B
99 100parallel
Strand 7
B
117 118parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
23 30parallel
Strand 3
B
41 51parallel
Strand 4
B
69 71parallel
Strand 5
B
87 88parallel
Strand 6
B
105 106parallel
Strand 7
B
123 124parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
35 36parallel
Strand 3
B
56 57parallel
Strand 4
B
76 77parallel
Strand 5
B
93 94parallel
Strand 6
B
111 112parallel
Strand 7
B
128 131parallel
Strand 8
B
136 140anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
23 30parallel
Strand 3
C
41 51parallel
Strand 4
C
69 71parallel
Strand 5
C
87 88parallel
Strand 6
C
105 106parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
23 30parallel
Strand 3
C
41 51parallel
Strand 4
C
62 64parallel
Strand 5
C
82 84parallel
Strand 6
C
99 100parallel
Strand 7
C
117 118parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 18first strand
Strand 2
C
35 36parallel
Strand 3
C
56 57parallel
Strand 4
C
76 77parallel
Strand 5
C
92 94parallel
Strand 6
C
110 112parallel
Strand 7
C
128 131parallel
Strand 8
C
136 140anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 12first strand
Strand 2
D
23 30parallel
Strand 3
D
41 51parallel
Strand 4
D
69 71parallel
Strand 5
D
87 88parallel
Strand 6
D
105 106parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 12first strand
Strand 2
D
23 30parallel
Strand 3
D
41 51parallel
Strand 4
D
62 64parallel
Strand 5
D
82 84parallel
Strand 6
D
99 100parallel
Strand 7
D
117 118parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 18first strand
Strand 2
D
35 36parallel
Strand 3
D
56 57parallel
Strand 4
D
76 77parallel
Strand 5
D
92 94parallel
Strand 6
D
110 112parallel
Strand 7
D
128 131parallel
Strand 8
D
136 140anti-parallel
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