Analysis of interatomic Contacts of Structural Units in PDB entry:
4MFP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MFP entry

There is 1 chain in PDB entry 4MFP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4MFP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
13 15Right-handed 310
Helix 3
3
A
16 27Right-handed alpha
Helix 4
4
A
37 48Right-handed alpha
Helix 5
5
A
51 62Right-handed alpha
Helix 6
6
A
68 84Right-handed alpha
Helix 7
7
A
100 103Right-handed 310
Helix 8
8
A
104 109Right-handed alpha
Helix 9
9
A
109 129Right-handed alpha
Helix 10
10
A
132 141Right-handed alpha
Helix 11
11
A
141 155Right-handed alpha
Helix 12
12
A
161 170Right-handed alpha
Helix 13
13
A
205 224Right-handed alpha
Helix 14
14
A
237 246Right-handed 310
Helix 15
15
A
251 258Right-handed alpha
Helix 16
16
A
273 284Right-handed alpha
Helix 17
17
A
289 293Right-handed 310
Helix 18
18
A
297 309Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4MFP.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
179 185anti-parallel
Strand 3
A
191 196anti-parallel
Strand 4
A
231 236parallel
Strand 5
A
316 321anti-parallel
Strand 6
A
261 262anti-parallel
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