Analysis of interatomic Contacts of Structural Units in PDB entry:
4MGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MGC entry

There are 10 chains in PDB entry 4MGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 306GLU 380
A
 ALA 382LYS 416
A
 VAL 418LYS 529
A
 LYS 531LEU 549
B
 SER 305GLU 380
B
 ALA 382LYS 416
B
 VAL 418LYS 529
B
 LYS 531LEU 549
F
 LYS 688GLU 696
G
 LYS 688GLU 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4MGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
306 310Right-handed 310
Helix 2
2
A
311 323Right-handed alpha
Helix 3
3
A
338 364Right-handed alpha
Helix 4
4
A
366 370Right-handed 310
Helix 5
5
A
371 396Right-handed alpha
Helix 6
6
A
413 418Right-handed 310
Helix 7
7
A
420 439Right-handed alpha
Helix 8
8
A
441 456Right-handed alpha
Helix 9
9
A
469 493Right-handed alpha
Helix 10
10
A
496 530Right-handed alpha
Helix 11
11
A
537 546Right-handed alpha
Helix 12
12
B
311 322Right-handed alpha
Helix 13
13
B
338 362Right-handed alpha
Helix 14
14
B
371 396Right-handed alpha
Helix 15
15
B
412 416Right-handed alpha
Helix 16
16
B
420 439Right-handed alpha
Helix 17
17
B
441 456Right-handed alpha
Helix 18
18
B
457 461Right-handed 310
Helix 19
19
B
471 493Right-handed alpha
Helix 20
20
B
496 531Right-handed alpha
Helix 21
21
B
537 546Right-handed alpha
Helix 22
22
F
689 696Right-handed alpha
Helix 23
23
G
689 694Right-handed alpha
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There are 2 sheets in PDB entry 4MGC. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 405first strand
Strand 2
A
408 411anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 405first strand
Strand 2
B
408 411anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il