Analysis of interatomic Contacts of Structural Units in PDB entry:
4MGG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4MGG entry

There are 2 chains in PDB entry 4MGG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER -1	SER 367
B	MET 1	ASP 293

There are121 helices in PDB entry 4MGG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	25	Right-handed 310
Helix 2	2	A	60	73	Right-handed alpha
Helix 3	3	A	74	76	Right-handed 310
Helix 4	4	A	83	95	Right-handed alpha
Helix 5	5	A	98	118	Right-handed alpha
Helix 6	6	A	120	125	Right-handed alpha
Helix 7	7	A	143	157	Right-handed alpha
Helix 8	8	A	169	184	Right-handed alpha
Helix 9	9	A	199	210	Right-handed alpha
Helix 10	10	A	223	232	Right-handed alpha
Helix 11	11	A	246	256	Right-handed alpha
Helix 12	12	A	271	285	Right-handed alpha
Helix 13	13	A	297	310	Right-handed alpha
Helix 14	14	A	312	314	Right-handed 310
Helix 15	15	A	321	326	Right-handed 310
Helix 16	16	A	355	360	Right-handed alpha
Helix 17	17	B	23	25	Right-handed 310
Helix 18	18	B	61	73	Right-handed alpha
Helix 19	19	B	74	76	Right-handed 310
Helix 20	20	B	83	95	Right-handed alpha
Helix 21	21	B	98	118	Right-handed alpha
Helix 22	22	B	120	125	Right-handed alpha
Helix 23	23	B	143	157	Right-handed alpha
Helix 24	24	B	169	183	Right-handed alpha
Helix 25	25	B	199	210	Right-handed alpha
Helix 26	26	B	223	232	Right-handed alpha
Helix 27	27	B	246	256	Right-handed alpha
Helix 28	28	B	271	285	Right-handed alpha
Helix 29	29	B	297	310	Right-handed alpha
Helix 30	30	B	311	314	Right-handed 310
Helix 31	31	B	321	326	Right-handed 310
Helix 32	32	B	355	360	Right-handed alpha
Helix 33	33	C	60	73	Right-handed alpha
Helix 34	34	C	74	76	Right-handed 310
Helix 35	35	C	83	95	Right-handed alpha
Helix 36	36	C	98	118	Right-handed alpha
Helix 37	37	C	120	125	Right-handed alpha
Helix 38	38	C	143	157	Right-handed alpha
Helix 39	39	C	169	182	Right-handed alpha
Helix 40	40	C	199	210	Right-handed alpha
Helix 41	41	C	223	232	Right-handed alpha
Helix 42	42	C	246	256	Right-handed alpha
Helix 43	43	C	271	285	Right-handed alpha
Helix 44	44	C	297	310	Right-handed alpha
Helix 45	45	C	311	314	Right-handed 310
Helix 46	46	C	321	325	Right-handed 310
Helix 47	47	C	355	360	Right-handed alpha
Helix 48	48	D	23	25	Right-handed 310
Helix 49	49	D	62	77	Right-handed alpha
Helix 50	50	D	83	95	Right-handed alpha
Helix 51	51	D	98	118	Right-handed alpha
Helix 52	52	D	120	125	Right-handed alpha
Helix 53	53	D	143	156	Right-handed alpha
Helix 54	54	D	169	183	Right-handed alpha
Helix 55	55	D	199	210	Right-handed alpha
Helix 56	56	D	223	232	Right-handed alpha
Helix 57	57	D	246	256	Right-handed alpha
Helix 58	58	D	271	285	Right-handed alpha
Helix 59	59	D	297	310	Right-handed alpha
Helix 60	60	D	312	314	Right-handed 310
Helix 61	61	D	321	326	Right-handed 310
Helix 62	62	D	355	360	Right-handed alpha
Helix 63	63	E	23	25	Right-handed 310
Helix 64	64	E	62	71	Right-handed alpha
Helix 65	65	E	72	76	Right-handed 310
Helix 66	66	E	83	95	Right-handed alpha
Helix 67	67	E	98	118	Right-handed alpha
Helix 68	68	E	120	125	Right-handed alpha
Helix 69	69	E	143	158	Right-handed alpha
Helix 70	70	E	169	184	Right-handed alpha
Helix 71	71	E	199	210	Right-handed alpha
Helix 72	72	E	223	232	Right-handed alpha
Helix 73	73	E	246	256	Right-handed alpha
Helix 74	74	E	271	285	Right-handed alpha
Helix 75	75	E	297	310	Right-handed alpha
Helix 76	76	E	311	314	Right-handed 310
Helix 77	77	E	321	326	Right-handed 310
Helix 78	78	E	355	360	Right-handed alpha
Helix 79	79	F	23	25	Right-handed 310
Helix 80	80	F	61	77	Right-handed alpha
Helix 81	81	F	83	95	Right-handed alpha
Helix 82	82	F	98	118	Right-handed alpha
Helix 83	83	F	120	125	Right-handed alpha
Helix 84	84	F	143	157	Right-handed alpha
Helix 85	85	F	169	184	Right-handed alpha
Helix 86	86	F	199	209	Right-handed alpha
Helix 87	87	F	223	232	Right-handed alpha
Helix 88	88	F	246	257	Right-handed alpha
Helix 89	89	F	271	285	Right-handed alpha
Helix 90	90	F	297	310	Right-handed alpha
Helix 91	91	F	312	314	Right-handed 310
Helix 92	92	F	321	326	Right-handed 310
Helix 93	93	F	355	360	Right-handed alpha
Helix 94	94	G	61	77	Right-handed alpha
Helix 95	95	G	83	95	Right-handed alpha
Helix 96	96	G	98	118	Right-handed alpha
Helix 97	97	G	120	125	Right-handed alpha
Helix 98	98	G	143	157	Right-handed alpha
Helix 99	99	G	169	183	Right-handed alpha
Helix 100	100	G	199	210	Right-handed alpha
Helix 101	101	G	223	232	Right-handed alpha
Helix 102	102	G	246	256	Right-handed alpha
Helix 103	103	G	271	285	Right-handed alpha
Helix 104	104	G	297	310	Right-handed alpha
Helix 105	105	G	312	314	Right-handed 310
Helix 106	106	G	321	326	Right-handed 310
Helix 107	107	G	355	360	Right-handed alpha
Helix 108	108	H	61	77	Right-handed alpha
Helix 109	109	H	83	95	Right-handed alpha
Helix 110	110	H	98	118	Right-handed alpha
Helix 111	111	H	120	125	Right-handed alpha
Helix 112	112	H	143	157	Right-handed alpha
Helix 113	113	H	169	183	Right-handed alpha
Helix 114	114	H	199	210	Right-handed alpha
Helix 115	115	H	223	232	Right-handed alpha
Helix 116	116	H	246	256	Right-handed alpha
Helix 117	117	H	271	285	Right-handed alpha
Helix 118	118	H	297	310	Right-handed alpha
Helix 119	119	H	312	314	Right-handed 310
Helix 120	120	H	321	326	Right-handed 310
Helix 121	121	H	355	360	Right-handed alpha

There are 39 sheets in PDB entry 4MGG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	50	first strand
Strand 2	A	30	40	anti-parallel
Strand 3	A	3	14	anti-parallel
Strand 4	A	364	366	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	21	first strand
Strand 2	A	27	28	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	134	first strand
Strand 2	A	341	342	anti-parallel

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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	139	first strand
Strand 2	A	161	165	parallel
Strand 3	A	189	193	parallel
Strand 4	A	216	218	parallel
Strand 5	A	238	240	parallel
Strand 6	A	261	265	parallel
Strand 7	A	289	292	parallel
Strand 8	A	316	319	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	331	332	first strand
Strand 2	A	353	354	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	50	first strand
Strand 2	B	30	40	anti-parallel
Strand 3	B	3	14	anti-parallel
Strand 4	B	364	366	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	21	first strand
Strand 2	B	27	28	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	134	first strand
Strand 2	B	341	342	anti-parallel

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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	139	first strand
Strand 2	B	161	165	parallel
Strand 3	B	189	193	parallel
Strand 4	B	216	218	parallel
Strand 5	B	238	240	parallel
Strand 6	B	261	265	parallel
Strand 7	B	289	292	parallel
Strand 8	B	316	319	parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	331	332	first strand
Strand 2	B	353	354	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	50	first strand
Strand 2	C	30	40	anti-parallel
Strand 3	C	3	14	anti-parallel
Strand 4	C	364	366	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	22	first strand
Strand 2	C	26	28	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	134	first strand
Strand 2	C	341	342	anti-parallel

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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	139	first strand
Strand 2	C	161	165	parallel
Strand 3	C	189	193	parallel
Strand 4	C	216	218	parallel
Strand 5	C	238	240	parallel
Strand 6	C	261	265	parallel
Strand 7	C	289	292	parallel
Strand 8	C	316	319	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	331	332	first strand
Strand 2	C	353	354	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	50	first strand
Strand 2	D	30	40	anti-parallel
Strand 3	D	3	14	anti-parallel
Strand 4	D	364	366	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	21	first strand
Strand 2	D	27	28	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	134	first strand
Strand 2	D	341	342	anti-parallel

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There are 8 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	139	first strand
Strand 2	D	161	165	parallel
Strand 3	D	189	193	parallel
Strand 4	D	216	218	parallel
Strand 5	D	238	240	parallel
Strand 6	D	261	265	parallel
Strand 7	D	289	292	parallel
Strand 8	D	316	319	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	331	332	first strand
Strand 2	D	353	354	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	50	first strand
Strand 2	E	30	40	anti-parallel
Strand 3	E	3	14	anti-parallel
Strand 4	E	364	366	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	21	first strand
Strand 2	E	27	28	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	134	first strand
Strand 2	E	341	343	anti-parallel
Strand 3	E	336	338	anti-parallel

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There are 8 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	139	first strand
Strand 2	E	161	165	parallel
Strand 3	E	189	193	parallel
Strand 4	E	216	218	parallel
Strand 5	E	238	240	parallel
Strand 6	E	261	265	parallel
Strand 7	E	289	292	parallel
Strand 8	E	316	319	parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	331	332	first strand
Strand 2	E	353	354	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	50	first strand
Strand 2	F	30	40	anti-parallel
Strand 3	F	3	14	anti-parallel
Strand 4	F	364	366	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	21	first strand
Strand 2	F	27	28	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	134	first strand
Strand 2	F	341	342	anti-parallel

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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	137	139	first strand
Strand 2	F	161	165	parallel
Strand 3	F	189	193	parallel
Strand 4	F	216	218	parallel
Strand 5	F	238	240	parallel
Strand 6	F	261	265	parallel
Strand 7	F	289	292	parallel
Strand 8	F	316	319	parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	331	332	first strand
Strand 2	F	353	354	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	50	first strand
Strand 2	G	30	40	anti-parallel
Strand 3	G	3	14	anti-parallel
Strand 4	G	364	366	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	134	first strand
Strand 2	G	341	342	anti-parallel

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There are 8 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	137	138	first strand
Strand 2	G	161	165	parallel
Strand 3	G	189	193	parallel
Strand 4	G	216	218	parallel
Strand 5	G	238	240	parallel
Strand 6	G	261	265	parallel
Strand 7	G	289	292	parallel
Strand 8	G	316	319	parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	331	332	first strand
Strand 2	G	353	354	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	50	first strand
Strand 2	H	30	40	anti-parallel
Strand 3	H	3	14	anti-parallel
Strand 4	H	364	366	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	21	first strand
Strand 2	H	27	28	anti-parallel

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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	133	134	first strand
Strand 2	H	341	342	anti-parallel

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There are 8 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	137	139	first strand
Strand 2	H	161	165	parallel
Strand 3	H	189	193	parallel
Strand 4	H	216	218	parallel
Strand 5	H	238	240	parallel
Strand 6	H	261	265	parallel
Strand 7	H	289	292	parallel
Strand 8	H	316	319	parallel

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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	331	332	first strand
Strand 2	H	353	354	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4MGG

Analysis of interatomic Contacts of Structural Units in PDB entry:
4MGG