Analysis of interatomic Contacts of Structural Units in PDB entry:
4MH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MH8 entry

There is 1 chain in PDB entry 4MH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 24PRO 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4MH8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 74Right-handed alpha
Helix 2
2
A
74 84Right-handed alpha
Helix 3
3
A
115 120Right-handed alpha
Helix 4
4
A
131 137Right-handed alpha
Helix 5
5
A
154 158Right-handed 310
Helix 6
6
A
164 169Right-handed 310
Helix 7
7
A
194 213Right-handed alpha
Helix 8
8
A
232 251Right-handed alpha
Helix 9
9
A
281 290Right-handed alpha
Helix 10
10
A
296 308Right-handed alpha
Helix 11
11
A
309 311Right-handed 310
Helix 12
12
A
316 321Right-handed alpha
Helix 13
13
A
337 353Right-handed alpha
Helix 14
14
A
400 405Right-handed alpha
Helix 15
15
A
407 428Right-handed alpha
Helix 16
16
A
456 465Right-handed alpha
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There are 5 sheets in PDB entry 4MH8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 90first strand
Strand 2
A
181 185anti-parallel
Strand 3
A
170 172anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 101first strand
Strand 2
A
110 113anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 222first strand
Strand 2
A
225 230anti-parallel
Strand 3
A
145 150anti-parallel
Strand 4
A
260 263anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
271 274anti-parallel
Strand 3
A
277 280anti-parallel
Strand 4
A
357 358anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 398first strand
Strand 2
A
376 385anti-parallel
Strand 3
A
366 372anti-parallel
Strand 4
A
432 435parallel
Strand 5
A
470 472parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il