Analysis of interatomic Contacts of Structural Units in PDB entry:
4MI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MI4 entry

There are 3 chains in PDB entry 4MI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ARG 171
B
 SER 3ASN 170
C
 GLN 4GLU 173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4MI4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
14 23Right-handed alpha
Helix 3
3
A
24 29Right-handed alpha
Helix 4
4
A
30 32Right-handed 310
Helix 5
5
A
38 49Right-handed alpha
Helix 6
6
A
91 94Right-handed 310
Helix 7
7
A
98 113Right-handed alpha
Helix 8
8
A
127 137Right-handed alpha
Helix 9
9
A
165 170Right-handed alpha
Helix 10
10
B
11 13Right-handed 310
Helix 11
11
B
14 23Right-handed alpha
Helix 12
12
B
24 30Right-handed alpha
Helix 13
13
B
38 49Right-handed alpha
Helix 14
14
B
91 94Right-handed 310
Helix 15
15
B
98 113Right-handed alpha
Helix 16
16
B
127 137Right-handed alpha
Helix 17
17
B
165 170Right-handed alpha
Helix 18
18
C
11 13Right-handed 310
Helix 19
19
C
14 23Right-handed alpha
Helix 20
20
C
24 29Right-handed alpha
Helix 21
21
C
30 32Right-handed 310
Helix 22
22
C
38 49Right-handed alpha
Helix 23
23
C
91 94Right-handed 310
Helix 24
24
C
98 113Right-handed alpha
Helix 25
25
C
127 137Right-handed alpha
Helix 26
26
C
165 171Right-handed alpha
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There are 3 sheets in PDB entry 4MI4. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
56 61anti-parallel
Strand 3
A
67 77anti-parallel
Strand 4
A
82 89anti-parallel
Strand 5
A
118 124parallel
Strand 6
A
154 164anti-parallel
Strand 7
A
140 151anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
56 61anti-parallel
Strand 3
B
67 77anti-parallel
Strand 4
B
82 89anti-parallel
Strand 5
B
118 124parallel
Strand 6
B
154 164anti-parallel
Strand 7
B
140 151anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 9first strand
Strand 2
C
56 62anti-parallel
Strand 3
C
67 77anti-parallel
Strand 4
C
82 89anti-parallel
Strand 5
C
118 124parallel
Strand 6
C
154 164anti-parallel
Strand 7
C
140 151anti-parallel
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