Analysis of interatomic Contacts of Structural Units in PDB entry:
4MIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MIE entry

There are 4 chains in PDB entry 4MIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 339
B
 MET 1GLN 339
C
 MET 1GLN 339
D
 HIS -4GLN 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 4MIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
37 49Right-handed alpha
Helix 3
3
A
57 64Right-handed alpha
Helix 4
4
A
75 77Right-handed 310
Helix 5
5
A
78 87Right-handed alpha
Helix 6
6
A
102 114Right-handed alpha
Helix 7
7
A
125 129Right-handed 310
Helix 8
8
A
130 142Right-handed alpha
Helix 9
9
A
167 172Right-handed alpha
Helix 10
10
A
174 186Right-handed alpha
Helix 11
11
A
273 278Right-handed alpha
Helix 12
12
A
278 295Right-handed alpha
Helix 13
13
A
303 324Right-handed alpha
Helix 14
14
A
335 339Right-handed 310
Helix 15
15
B
11 24Right-handed alpha
Helix 16
16
B
37 48Right-handed alpha
Helix 17
17
B
57 62Right-handed alpha
Helix 18
18
B
78 87Right-handed alpha
Helix 19
19
B
102 114Right-handed alpha
Helix 20
20
B
125 129Right-handed 310
Helix 21
21
B
130 142Right-handed alpha
Helix 22
22
B
167 172Right-handed alpha
Helix 23
23
B
174 186Right-handed alpha
Helix 24
24
B
273 278Right-handed alpha
Helix 25
25
B
278 294Right-handed alpha
Helix 26
26
B
303 324Right-handed alpha
Helix 27
27
B
335 339Right-handed 310
Helix 28
28
C
11 24Right-handed alpha
Helix 29
29
C
37 49Right-handed alpha
Helix 30
30
C
57 62Right-handed alpha
Helix 31
31
C
75 88Right-handed alpha
Helix 32
32
C
102 115Right-handed alpha
Helix 33
33
C
125 129Right-handed 310
Helix 34
34
C
130 142Right-handed alpha
Helix 35
35
C
167 172Right-handed alpha
Helix 36
36
C
174 186Right-handed alpha
Helix 37
37
C
273 278Right-handed alpha
Helix 38
38
C
278 296Right-handed alpha
Helix 39
39
C
303 324Right-handed alpha
Helix 40
40
C
335 339Right-handed 310
Helix 41
41
D
11 24Right-handed alpha
Helix 42
42
D
37 48Right-handed alpha
Helix 43
43
D
57 63Right-handed alpha
Helix 44
44
D
75 77Right-handed 310
Helix 45
45
D
78 87Right-handed alpha
Helix 46
46
D
102 115Right-handed alpha
Helix 47
47
D
125 129Right-handed 310
Helix 48
48
D
130 141Right-handed alpha
Helix 49
49
D
167 172Right-handed alpha
Helix 50
50
D
174 186Right-handed alpha
Helix 51
51
D
273 278Right-handed alpha
Helix 52
52
D
278 295Right-handed alpha
Helix 53
53
D
303 324Right-handed alpha
Helix 54
54
D
335 339Right-handed 310
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There are 6 sheets in PDB entry 4MIE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
28 34parallel
Strand 3
A
3 8parallel
Strand 4
A
69 72parallel
Strand 5
A
92 95parallel
Strand 6
A
121 123parallel
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There are 18 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 328first strand
Strand 2
A
189 195anti-parallel
Strand 3
A
212 218anti-parallel
Strand 4
A
223 229anti-parallel
Strand 5
A
148 156parallel
Strand 6
A
237 244anti-parallel
Strand 7
A
248 250anti-parallel
Strand 8
D
259 262anti-parallel
Strand 9
D
265 269anti-parallel
Strand 10
C
265 269anti-parallel
Strand 11
C
259 262anti-parallel
Strand 12
B
248 250anti-parallel
Strand 13
B
237 244anti-parallel
Strand 14
B
148 156anti-parallel
Strand 15
B
223 229parallel
Strand 16
B
212 218anti-parallel
Strand 17
B
189 195anti-parallel
Strand 18
B
327 328anti-parallel
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There are 18 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
327 328first strand
Strand 2
C
189 195anti-parallel
Strand 3
C
212 218anti-parallel
Strand 4
C
223 229anti-parallel
Strand 5
C
148 156parallel
Strand 6
C
237 244anti-parallel
Strand 7
C
248 250anti-parallel
Strand 8
B
259 262anti-parallel
Strand 9
B
265 269anti-parallel
Strand 10
A
265 269anti-parallel
Strand 11
A
259 262anti-parallel
Strand 12
D
248 250anti-parallel
Strand 13
D
237 244anti-parallel
Strand 14
D
148 156anti-parallel
Strand 15
D
223 229parallel
Strand 16
D
212 218anti-parallel
Strand 17
D
189 195anti-parallel
Strand 18
D
327 328anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
28 34parallel
Strand 3
B
3 8parallel
Strand 4
B
69 72parallel
Strand 5
B
92 95parallel
Strand 6
B
121 123parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
28 34parallel
Strand 3
C
3 8parallel
Strand 4
C
69 72parallel
Strand 5
C
92 95parallel
Strand 6
C
121 123parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 54first strand
Strand 2
D
28 34parallel
Strand 3
D
3 8parallel
Strand 4
D
69 72parallel
Strand 5
D
92 96parallel
Strand 6
D
121 124parallel
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