Analysis of interatomic Contacts of Structural Units in PDB entry:
4MIV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4MIV entry

There are 6 chains in PDB entry 4MIV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 22	SER 69
A	SER 71	HIS 505
B	PRO 22	SER 69
B	SER 71	LEU 502
C	ARG 21	SER 69
C	SER 71	TYR 312

There are152 helices in PDB entry 4MIV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	37	41	Right-handed 310
Helix 2	2	A	47	56	Right-handed alpha
Helix 3	3	A	69	78	Right-handed alpha
Helix 4	4	A	82	87	Right-handed alpha
Helix 5	5	A	106	114	Right-handed alpha
Helix 6	6	A	144	151	Right-handed alpha
Helix 7	7	A	151	165	Right-handed alpha
Helix 8	8	A	187	191	Right-handed 310
Helix 9	9	A	229	260	Right-handed alpha
Helix 10	10	A	262	264	Right-handed 310
Helix 11	11	A	286	290	Right-handed alpha
Helix 12	12	A	301	305	Right-handed 310
Helix 13	13	A	317	326	Right-handed alpha
Helix 14	14	A	348	353	Right-handed 310
Helix 15	15	A	399	404	Right-handed alpha
Helix 16	16	A	405	417	Right-handed alpha
Helix 17	17	A	426	432	Right-handed alpha
Helix 18	18	A	454	456	Right-handed 310
Helix 19	19	A	457	475	Right-handed alpha
Helix 20	20	B	37	41	Right-handed 310
Helix 21	21	B	47	56	Right-handed alpha
Helix 22	22	B	69	78	Right-handed alpha
Helix 23	23	B	82	87	Right-handed alpha
Helix 24	24	B	106	114	Right-handed alpha
Helix 25	25	B	144	151	Right-handed alpha
Helix 26	26	B	151	165	Right-handed alpha
Helix 27	27	B	187	191	Right-handed 310
Helix 28	28	B	229	260	Right-handed alpha
Helix 29	29	B	262	264	Right-handed 310
Helix 30	30	B	286	290	Right-handed alpha
Helix 31	31	B	301	305	Right-handed 310
Helix 32	32	B	317	326	Right-handed alpha
Helix 33	33	B	348	353	Right-handed 310
Helix 34	34	B	399	404	Right-handed alpha
Helix 35	35	B	405	417	Right-handed alpha
Helix 36	36	B	426	432	Right-handed alpha
Helix 37	37	B	454	456	Right-handed 310
Helix 38	38	B	457	475	Right-handed alpha
Helix 39	39	C	37	41	Right-handed 310
Helix 40	40	C	47	56	Right-handed alpha
Helix 41	41	C	69	78	Right-handed alpha
Helix 42	42	C	82	87	Right-handed alpha
Helix 43	43	C	106	114	Right-handed alpha
Helix 44	44	C	144	151	Right-handed alpha
Helix 45	45	C	151	165	Right-handed alpha
Helix 46	46	C	187	191	Right-handed 310
Helix 47	47	C	229	260	Right-handed alpha
Helix 48	48	C	262	264	Right-handed 310
Helix 49	49	C	286	290	Right-handed alpha
Helix 50	50	C	301	305	Right-handed 310
Helix 51	51	C	317	326	Right-handed alpha
Helix 52	52	C	348	353	Right-handed 310
Helix 53	53	C	399	404	Right-handed alpha
Helix 54	54	C	405	417	Right-handed alpha
Helix 55	55	C	426	432	Right-handed alpha
Helix 56	56	C	454	456	Right-handed 310
Helix 57	57	C	457	475	Right-handed alpha
Helix 58	58	D	37	41	Right-handed 310
Helix 59	59	D	47	56	Right-handed alpha
Helix 60	60	D	69	78	Right-handed alpha
Helix 61	61	D	82	87	Right-handed alpha
Helix 62	62	D	106	114	Right-handed alpha
Helix 63	63	D	144	151	Right-handed alpha
Helix 64	64	D	151	165	Right-handed alpha
Helix 65	65	D	187	191	Right-handed 310
Helix 66	66	D	229	260	Right-handed alpha
Helix 67	67	D	262	264	Right-handed 310
Helix 68	68	D	286	290	Right-handed alpha
Helix 69	69	D	301	305	Right-handed 310
Helix 70	70	D	317	326	Right-handed alpha
Helix 71	71	D	348	353	Right-handed 310
Helix 72	72	D	399	404	Right-handed alpha
Helix 73	73	D	405	417	Right-handed alpha
Helix 74	74	D	426	432	Right-handed alpha
Helix 75	75	D	454	456	Right-handed 310
Helix 76	76	D	457	475	Right-handed alpha
Helix 77	77	E	37	41	Right-handed 310
Helix 78	78	E	47	56	Right-handed alpha
Helix 79	79	E	69	78	Right-handed alpha
Helix 80	80	E	82	87	Right-handed alpha
Helix 81	81	E	106	114	Right-handed alpha
Helix 82	82	E	144	151	Right-handed alpha
Helix 83	83	E	151	165	Right-handed alpha
Helix 84	84	E	187	191	Right-handed 310
Helix 85	85	E	229	260	Right-handed alpha
Helix 86	86	E	262	264	Right-handed 310
Helix 87	87	E	286	290	Right-handed alpha
Helix 88	88	E	301	305	Right-handed 310
Helix 89	89	E	317	326	Right-handed alpha
Helix 90	90	E	348	353	Right-handed 310
Helix 91	91	E	399	404	Right-handed alpha
Helix 92	92	E	405	418	Right-handed alpha
Helix 93	93	E	426	432	Right-handed alpha
Helix 94	94	E	454	456	Right-handed 310
Helix 95	95	E	457	475	Right-handed alpha
Helix 96	96	F	37	41	Right-handed 310
Helix 97	97	F	47	56	Right-handed alpha
Helix 98	98	F	69	78	Right-handed alpha
Helix 99	99	F	82	87	Right-handed alpha
Helix 100	100	F	106	114	Right-handed alpha
Helix 101	101	F	144	151	Right-handed alpha
Helix 102	102	F	151	165	Right-handed alpha
Helix 103	103	F	187	191	Right-handed 310
Helix 104	104	F	229	260	Right-handed alpha
Helix 105	105	F	262	264	Right-handed 310
Helix 106	106	F	286	290	Right-handed alpha
Helix 107	107	F	301	305	Right-handed 310
Helix 108	108	F	317	326	Right-handed alpha
Helix 109	109	F	348	353	Right-handed 310
Helix 110	110	F	399	404	Right-handed alpha
Helix 111	111	F	405	418	Right-handed alpha
Helix 112	112	F	426	432	Right-handed alpha
Helix 113	113	F	454	456	Right-handed 310
Helix 114	114	F	457	475	Right-handed alpha
Helix 115	115	G	37	41	Right-handed 310
Helix 116	116	G	47	56	Right-handed alpha
Helix 117	117	G	69	78	Right-handed alpha
Helix 118	118	G	82	87	Right-handed alpha
Helix 119	119	G	106	114	Right-handed alpha
Helix 120	120	G	145	151	Right-handed alpha
Helix 121	121	G	151	165	Right-handed alpha
Helix 122	122	G	187	191	Right-handed 310
Helix 123	123	G	229	260	Right-handed alpha
Helix 124	124	G	262	264	Right-handed 310
Helix 125	125	G	286	290	Right-handed alpha
Helix 126	126	G	301	305	Right-handed 310
Helix 127	127	G	317	326	Right-handed alpha
Helix 128	128	G	348	353	Right-handed 310
Helix 129	129	G	399	404	Right-handed alpha
Helix 130	130	G	405	417	Right-handed alpha
Helix 131	131	G	426	432	Right-handed alpha
Helix 132	132	G	454	456	Right-handed 310
Helix 133	133	G	457	475	Right-handed alpha
Helix 134	134	H	37	41	Right-handed 310
Helix 135	135	H	47	56	Right-handed alpha
Helix 136	136	H	69	78	Right-handed alpha
Helix 137	137	H	82	87	Right-handed alpha
Helix 138	138	H	106	114	Right-handed alpha
Helix 139	139	H	144	151	Right-handed alpha
Helix 140	140	H	151	165	Right-handed alpha
Helix 141	141	H	187	191	Right-handed 310
Helix 142	142	H	229	260	Right-handed alpha
Helix 143	143	H	262	264	Right-handed 310
Helix 144	144	H	286	290	Right-handed alpha
Helix 145	145	H	301	305	Right-handed 310
Helix 146	146	H	317	326	Right-handed alpha
Helix 147	147	H	348	353	Right-handed 310
Helix 148	148	H	399	404	Right-handed alpha
Helix 149	149	H	405	417	Right-handed alpha
Helix 150	150	H	426	432	Right-handed alpha
Helix 151	151	H	454	456	Right-handed 310
Helix 152	152	H	457	475	Right-handed alpha

There are 31 sheets in PDB entry 4MIV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	139	first strand
Strand 2	A	117	122	parallel
Strand 3	A	171	176	parallel
Strand 4	A	24	30	parallel
Strand 5	A	266	272	parallel
Strand 6	A	294	297	anti-parallel
Strand 7	A	58	64	anti-parallel
Strand 8	A	291	292	anti-parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	139	first strand
Strand 2	A	117	122	parallel
Strand 3	A	171	176	parallel
Strand 4	A	24	30	parallel
Strand 5	A	266	272	parallel
Strand 6	A	294	297	anti-parallel
Strand 7	A	58	64	anti-parallel
Strand 8	A	308	314	parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	367	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	384	389	anti-parallel
Strand 4	A	436	440	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	487	first strand
Strand 2	A	495	497	anti-parallel

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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	139	first strand
Strand 2	B	117	122	parallel
Strand 3	B	171	176	parallel
Strand 4	B	24	30	parallel
Strand 5	B	266	272	parallel
Strand 6	B	294	297	anti-parallel
Strand 7	B	58	64	anti-parallel
Strand 8	B	291	292	anti-parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	139	first strand
Strand 2	B	117	122	parallel
Strand 3	B	171	176	parallel
Strand 4	B	24	30	parallel
Strand 5	B	266	272	parallel
Strand 6	B	294	297	anti-parallel
Strand 7	B	58	64	anti-parallel
Strand 8	B	308	314	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	367	first strand
Strand 2	B	373	381	anti-parallel
Strand 3	B	384	389	anti-parallel
Strand 4	B	436	440	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	487	first strand
Strand 2	B	495	497	anti-parallel

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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	139	first strand
Strand 2	C	117	122	parallel
Strand 3	C	171	176	parallel
Strand 4	C	24	30	parallel
Strand 5	C	266	272	parallel
Strand 6	C	294	297	anti-parallel
Strand 7	C	58	64	anti-parallel
Strand 8	C	291	292	anti-parallel

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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	139	first strand
Strand 2	C	117	122	parallel
Strand 3	C	171	176	parallel
Strand 4	C	24	30	parallel
Strand 5	C	266	272	parallel
Strand 6	C	294	297	anti-parallel
Strand 7	C	58	64	anti-parallel
Strand 8	C	308	314	parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	360	367	first strand
Strand 2	C	373	381	anti-parallel
Strand 3	C	384	389	anti-parallel
Strand 4	C	436	440	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	485	487	first strand
Strand 2	C	495	497	anti-parallel

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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	139	first strand
Strand 2	D	117	122	parallel
Strand 3	D	171	176	parallel
Strand 4	D	24	30	parallel
Strand 5	D	266	272	parallel
Strand 6	D	291	297	anti-parallel
Strand 7	D	58	64	anti-parallel
Strand 8	D	308	314	parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	360	367	first strand
Strand 2	D	373	381	anti-parallel
Strand 3	D	384	389	anti-parallel
Strand 4	D	436	440	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	485	487	first strand
Strand 2	D	495	497	anti-parallel

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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	139	first strand
Strand 2	E	117	122	parallel
Strand 3	E	171	176	parallel
Strand 4	E	24	30	parallel
Strand 5	E	266	272	parallel
Strand 6	E	294	297	anti-parallel
Strand 7	E	58	60	anti-parallel
Strand 8	E	308	309	parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	291	292	first strand
Strand 2	E	63	64	anti-parallel
Strand 3	E	313	314	parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	360	367	first strand
Strand 2	E	373	381	anti-parallel
Strand 3	E	384	389	anti-parallel
Strand 4	E	436	440	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	485	487	first strand
Strand 2	E	495	497	anti-parallel

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There are 8 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	139	first strand
Strand 2	F	117	122	parallel
Strand 3	F	171	176	parallel
Strand 4	F	24	30	parallel
Strand 5	F	266	272	parallel
Strand 6	F	294	297	anti-parallel
Strand 7	F	58	64	anti-parallel
Strand 8	F	291	292	anti-parallel

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There are 8 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	139	first strand
Strand 2	F	117	122	parallel
Strand 3	F	171	176	parallel
Strand 4	F	24	30	parallel
Strand 5	F	266	272	parallel
Strand 6	F	294	297	anti-parallel
Strand 7	F	58	64	anti-parallel
Strand 8	F	308	314	parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	360	367	first strand
Strand 2	F	373	381	anti-parallel
Strand 3	F	384	389	anti-parallel
Strand 4	F	436	440	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	485	487	first strand
Strand 2	F	495	497	anti-parallel

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There are 8 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	136	139	first strand
Strand 2	G	117	122	parallel
Strand 3	G	171	176	parallel
Strand 4	G	24	30	parallel
Strand 5	G	266	272	parallel
Strand 6	G	294	297	anti-parallel
Strand 7	G	58	60	anti-parallel
Strand 8	G	308	309	parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	291	292	first strand
Strand 2	G	63	64	anti-parallel
Strand 3	G	313	314	parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	360	367	first strand
Strand 2	G	373	381	anti-parallel
Strand 3	G	384	389	anti-parallel
Strand 4	G	436	440	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	485	487	first strand
Strand 2	G	495	497	anti-parallel

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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	136	139	first strand
Strand 2	H	117	122	parallel
Strand 3	H	171	176	parallel
Strand 4	H	24	30	parallel
Strand 5	H	266	272	parallel
Strand 6	H	294	297	anti-parallel
Strand 7	H	58	60	anti-parallel
Strand 8	H	308	309	parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	291	292	first strand
Strand 2	H	63	64	anti-parallel
Strand 3	H	313	314	parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	360	367	first strand
Strand 2	H	373	381	anti-parallel
Strand 3	H	384	389	anti-parallel
Strand 4	H	436	440	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	485	487	first strand
Strand 2	H	495	497	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4MIV

Analysis of interatomic Contacts of Structural Units in PDB entry:
4MIV