Analysis of interatomic Contacts of Structural Units in PDB entry:
4MJK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MJK entry

There are 2 chains in PDB entry 4MJK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1CYS 264
B
 MSE 1SER 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4MJK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
32 47Right-handed alpha
Helix 3
3
A
57 65Right-handed alpha
Helix 4
4
A
81 88Right-handed alpha
Helix 5
5
A
140 145Right-handed alpha
Helix 6
6
B
17 21Right-handed 310
Helix 7
7
B
32 47Right-handed alpha
Helix 8
8
B
51 61Right-handed alpha
Helix 9
9
B
61 65Right-handed alpha
Helix 10
10
B
81 89Right-handed alpha
Helix 11
11
B
106 110Right-handed alpha
Helix 12
12
B
140 145Right-handed alpha
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There are 10 sheets in PDB entry 4MJK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 73first strand
Strand 2
A
127 134anti-parallel
Strand 3
A
2 10anti-parallel
Strand 4
A
157 165anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
115 120anti-parallel
Strand 3
A
76 80anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 170first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
258 263anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
241 246anti-parallel
Strand 3
A
186 193anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
225 231anti-parallel
Strand 3
A
196 202anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 73first strand
Strand 2
B
127 134anti-parallel
Strand 3
B
2 10anti-parallel
Strand 4
B
157 165anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
115 120anti-parallel
Strand 3
B
76 80anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 170first strand
Strand 2
B
250 255anti-parallel
Strand 3
B
258 263anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 176first strand
Strand 2
B
241 246anti-parallel
Strand 3
B
186 193anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 181first strand
Strand 2
B
226 231anti-parallel
Strand 3
B
196 201anti-parallel
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