Analysis of interatomic Contacts of Structural Units in PDB entry:
4MJT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4MJT entry

There are 18 chains in PDB entry 4MJT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 36	TYR 271
B	SER 36	TYR 271
C	SER 36	TYR 271
D	SER 36	TYR 271
E	SER 36	TYR 271
F	SER 36	TYR 271
G	SER 36	TYR 271
H	SER 36	TYR 271
I	SER 36	TYR 271
J	GLN 9	LEU 17
K	GLN 9	LEU 17
L	GLN 9	LEU 17
M	PRO 10	LEU 17
N	PRO 10	LEU 17
O	GLN 9	LEU 17
P	GLN 9	LEU 17
Q	GLN 9	LEU 17
R	GLN 9	LEU 17

There are 85 helices in PDB entry 4MJT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	36	41	Right-handed 310
Helix 2	2	A	46	56	Right-handed alpha
Helix 3	3	A	119	126	Right-handed alpha
Helix 4	4	A	134	136	Right-handed 310
Helix 5	5	A	137	143	Right-handed alpha
Helix 6	6	A	150	155	Right-handed alpha
Helix 7	7	A	189	194	Right-handed alpha
Helix 8	8	A	195	197	Right-handed 310
Helix 9	9	A	228	230	Right-handed 310
Helix 10	10	A	235	244	Right-handed alpha
Helix 11	11	A	260	270	Right-handed 310
Helix 12	12	B	36	41	Right-handed 310
Helix 13	13	B	46	56	Right-handed alpha
Helix 14	14	B	119	126	Right-handed alpha
Helix 15	15	B	134	136	Right-handed 310
Helix 16	16	B	137	143	Right-handed alpha
Helix 17	17	B	150	155	Right-handed alpha
Helix 18	18	B	189	194	Right-handed alpha
Helix 19	19	B	195	197	Right-handed 310
Helix 20	20	B	235	244	Right-handed alpha
Helix 21	21	B	260	270	Right-handed 310
Helix 22	22	C	36	41	Right-handed 310
Helix 23	23	C	46	56	Right-handed alpha
Helix 24	24	C	119	126	Right-handed alpha
Helix 25	25	C	134	136	Right-handed 310
Helix 26	26	C	137	143	Right-handed alpha
Helix 27	27	C	150	155	Right-handed alpha
Helix 28	28	C	189	194	Right-handed alpha
Helix 29	29	C	228	230	Right-handed 310
Helix 30	30	C	235	244	Right-handed alpha
Helix 31	31	C	260	270	Right-handed 310
Helix 32	32	D	36	41	Right-handed 310
Helix 33	33	D	46	56	Right-handed alpha
Helix 34	34	D	119	126	Right-handed alpha
Helix 35	35	D	134	136	Right-handed 310
Helix 36	36	D	137	143	Right-handed alpha
Helix 37	37	D	150	155	Right-handed alpha
Helix 38	38	D	189	194	Right-handed alpha
Helix 39	39	D	235	244	Right-handed alpha
Helix 40	40	D	260	270	Right-handed 310
Helix 41	41	E	36	41	Right-handed 310
Helix 42	42	E	46	56	Right-handed alpha
Helix 43	43	E	119	126	Right-handed alpha
Helix 44	44	E	134	136	Right-handed 310
Helix 45	45	E	137	143	Right-handed alpha
Helix 46	46	E	150	155	Right-handed alpha
Helix 47	47	E	189	194	Right-handed alpha
Helix 48	48	E	228	230	Right-handed 310
Helix 49	49	E	235	244	Right-handed alpha
Helix 50	50	E	260	270	Right-handed 310
Helix 51	51	F	36	41	Right-handed 310
Helix 52	52	F	46	56	Right-handed alpha
Helix 53	53	F	119	126	Right-handed alpha
Helix 54	54	F	134	136	Right-handed 310
Helix 55	55	F	137	143	Right-handed alpha
Helix 56	56	F	150	155	Right-handed alpha
Helix 57	57	F	235	244	Right-handed alpha
Helix 58	58	F	260	268	Right-handed 310
Helix 59	59	G	36	41	Right-handed 310
Helix 60	60	G	46	56	Right-handed alpha
Helix 61	61	G	119	126	Right-handed alpha
Helix 62	62	G	134	136	Right-handed 310
Helix 63	63	G	137	143	Right-handed alpha
Helix 64	64	G	150	155	Right-handed alpha
Helix 65	65	G	189	194	Right-handed alpha
Helix 66	66	G	235	244	Right-handed alpha
Helix 67	67	G	260	270	Right-handed 310
Helix 68	68	H	36	41	Right-handed 310
Helix 69	69	H	46	56	Right-handed alpha
Helix 70	70	H	119	126	Right-handed alpha
Helix 71	71	H	134	136	Right-handed 310
Helix 72	72	H	137	143	Right-handed alpha
Helix 73	73	H	150	155	Right-handed alpha
Helix 74	74	H	189	194	Right-handed alpha
Helix 75	75	H	235	244	Right-handed alpha
Helix 76	76	H	260	270	Right-handed 310
Helix 77	77	I	36	41	Right-handed 310
Helix 78	78	I	46	56	Right-handed alpha
Helix 79	79	I	119	126	Right-handed alpha
Helix 80	80	I	134	136	Right-handed 310
Helix 81	81	I	137	143	Right-handed alpha
Helix 82	82	I	150	155	Right-handed alpha
Helix 83	83	I	189	194	Right-handed alpha
Helix 84	84	I	235	244	Right-handed alpha
Helix 85	85	I	260	270	Right-handed 310

There are 36 sheets in PDB entry 4MJT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	64	67	parallel
Strand 3	A	81	102	anti-parallel
Strand 4	A	72	78	anti-parallel
Strand 5	A	130	132	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	45	first strand
Strand 2	A	64	67	parallel
Strand 3	A	81	102	anti-parallel
Strand 4	A	171	186	anti-parallel
Strand 5	A	208	226	anti-parallel
Strand 6	A	201	205	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	116	first strand
Strand 2	A	159	168	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	254	255	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	64	67	parallel
Strand 3	B	81	102	anti-parallel
Strand 4	B	72	78	anti-parallel
Strand 5	B	130	132	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	64	67	parallel
Strand 3	B	81	102	anti-parallel
Strand 4	B	171	186	anti-parallel
Strand 5	B	208	226	anti-parallel
Strand 6	B	201	205	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	116	first strand
Strand 2	B	159	168	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	249	first strand
Strand 2	B	254	255	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	45	first strand
Strand 2	C	64	67	parallel
Strand 3	C	81	102	anti-parallel
Strand 4	C	72	78	anti-parallel
Strand 5	C	130	132	anti-parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	45	first strand
Strand 2	C	64	67	parallel
Strand 3	C	81	102	anti-parallel
Strand 4	C	171	186	anti-parallel
Strand 5	C	208	226	anti-parallel
Strand 6	C	201	205	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	116	first strand
Strand 2	C	159	168	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	249	first strand
Strand 2	C	254	255	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	45	first strand
Strand 2	D	64	67	parallel
Strand 3	D	81	102	anti-parallel
Strand 4	D	72	78	anti-parallel
Strand 5	D	130	132	anti-parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	45	first strand
Strand 2	D	64	67	parallel
Strand 3	D	81	102	anti-parallel
Strand 4	D	171	186	anti-parallel
Strand 5	D	208	226	anti-parallel
Strand 6	D	201	205	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	116	first strand
Strand 2	D	159	168	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	249	first strand
Strand 2	D	254	255	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	64	67	parallel
Strand 3	E	81	102	anti-parallel
Strand 4	E	72	78	anti-parallel
Strand 5	E	130	132	anti-parallel

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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	64	67	parallel
Strand 3	E	81	102	anti-parallel
Strand 4	E	171	186	anti-parallel
Strand 5	E	208	226	anti-parallel
Strand 6	E	201	205	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	116	first strand
Strand 2	E	159	168	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	248	249	first strand
Strand 2	E	254	255	anti-parallel

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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	45	first strand
Strand 2	F	64	67	parallel
Strand 3	F	81	102	anti-parallel
Strand 4	F	72	78	anti-parallel
Strand 5	F	171	186	first strand
Strand 6	F	208	226	anti-parallel
Strand 7	F	201	205	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	130	132	first strand
Strand 2	F	72	78	anti-parallel
Strand 3	F	81	102	anti-parallel
Strand 4	F	270	271	first strand

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	107	116	first strand
Strand 2	F	159	168	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	248	249	first strand
Strand 2	F	254	255	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	45	first strand
Strand 2	G	64	67	parallel
Strand 3	G	81	102	anti-parallel
Strand 4	G	72	78	anti-parallel
Strand 5	G	130	132	anti-parallel

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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	45	first strand
Strand 2	G	64	67	parallel
Strand 3	G	81	102	anti-parallel
Strand 4	G	171	186	anti-parallel
Strand 5	G	208	226	anti-parallel
Strand 6	G	201	205	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	107	116	first strand
Strand 2	G	159	168	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	248	249	first strand
Strand 2	G	254	255	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	64	67	parallel
Strand 3	H	81	102	anti-parallel
Strand 4	H	72	78	anti-parallel
Strand 5	H	130	132	anti-parallel

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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	64	67	parallel
Strand 3	H	81	102	anti-parallel
Strand 4	H	171	186	anti-parallel
Strand 5	H	208	226	anti-parallel
Strand 6	H	201	205	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	107	116	first strand
Strand 2	H	159	168	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	248	249	first strand
Strand 2	H	254	255	anti-parallel

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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	45	first strand
Strand 2	I	64	67	parallel
Strand 3	I	81	102	anti-parallel
Strand 4	I	72	78	anti-parallel
Strand 5	I	130	132	anti-parallel

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There are 6 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	44	45	first strand
Strand 2	I	64	67	parallel
Strand 3	I	81	102	anti-parallel
Strand 4	I	171	186	anti-parallel
Strand 5	I	208	226	anti-parallel
Strand 6	I	201	205	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	107	116	first strand
Strand 2	I	159	168	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	248	249	first strand
Strand 2	I	254	255	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4MJT

Analysis of interatomic Contacts of Structural Units in PDB entry:
4MJT