Analysis of interatomic Contacts of Structural Units in PDB entry:
4MJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MJZ entry

There are 2 chains in PDB entry 4MJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 20GLU 318
B
 GLY 21GLN 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4MJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 37Right-handed alpha
Helix 2
2
A
47 51Right-handed 310
Helix 3
3
A
56 72Right-handed alpha
Helix 4
4
A
73 75Right-handed 310
Helix 5
5
A
81 87Right-handed alpha
Helix 6
6
A
89 103Right-handed alpha
Helix 7
7
A
118 131Right-handed alpha
Helix 8
8
A
145 148Right-handed 310
Helix 9
9
A
149 154Right-handed alpha
Helix 10
10
A
169 173Right-handed 310
Helix 11
11
A
192 207Right-handed alpha
Helix 12
12
A
238 249Right-handed alpha
Helix 13
13
A
265 274Right-handed alpha
Helix 14
14
A
286 291Right-handed alpha
Helix 15
15
A
294 317Right-handed alpha
Helix 16
16
B
25 37Right-handed alpha
Helix 17
17
B
47 51Right-handed 310
Helix 18
18
B
56 72Right-handed alpha
Helix 19
19
B
73 75Right-handed 310
Helix 20
20
B
81 87Right-handed alpha
Helix 21
21
B
89 103Right-handed alpha
Helix 22
22
B
118 131Right-handed alpha
Helix 23
23
B
145 148Right-handed 310
Helix 24
24
B
149 154Right-handed alpha
Helix 25
25
B
169 173Right-handed 310
Helix 26
26
B
192 207Right-handed alpha
Helix 27
27
B
238 249Right-handed alpha
Helix 28
28
B
265 274Right-handed alpha
Helix 29
29
B
286 291Right-handed alpha
Helix 30
30
B
294 315Right-handed alpha
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There are 4 sheets in PDB entry 4MJZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 80first strand
Strand 2
A
40 44parallel
Strand 3
A
281 285parallel
Strand 4
A
253 255parallel
Strand 5
A
229 234parallel
Strand 6
A
159 165parallel
Strand 7
A
137 140parallel
Strand 8
A
110 115parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
190 191anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
40 44parallel
Strand 3
B
281 285parallel
Strand 4
B
253 255parallel
Strand 5
B
229 234parallel
Strand 6
B
159 165parallel
Strand 7
B
137 140parallel
Strand 8
B
110 115parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
190 191anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il