Analysis of interatomic Contacts of Structural Units in PDB entry:
4MLC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MLC entry

There is 1 chain in PDB entry 4MLC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6LEU 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4MLC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 36Right-handed alpha
Helix 2
2
A
55 68Right-handed alpha
Helix 3
3
A
80 95Right-handed alpha
Helix 4
4
A
105 110Right-handed 310
Helix 5
5
A
122 137Right-handed alpha
Helix 6
6
A
149 166Right-handed alpha
Helix 7
7
A
179 194Right-handed alpha
Helix 8
8
A
207 219Right-handed alpha
Helix 9
9
A
228 231Right-handed 310
Helix 10
10
A
243 247Right-handed 310
Helix 11
11
A
261 276Right-handed alpha
Helix 12
12
A
280 298Right-handed alpha
Helix 13
13
A
306 316Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 4MLC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 51first strand
Strand 2
A
7 14parallel
Strand 3
A
72 76parallel
Strand 4
A
97 100parallel
Strand 5
A
116 118parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 174first strand
Strand 2
A
141 146parallel
Strand 3
A
197 201parallel
Strand 4
A
224 226parallel
Strand 5
A
250 254parallel
Strand 6
A
338 344anti-parallel
Strand 7
A
347 350anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
323 325anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il