Analysis of interatomic Contacts of Structural Units in PDB entry:
4MLI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MLI entry

There are 4 chains in PDB entry 4MLI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 22ASN 103
C
 ASP 22GLY 104
B
 ALA 111THR 122
D
 ALA 111THR 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4MLI

There are 4 sheets in PDB entry 4MLI. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 68first strand
Strand 2
A
25 32anti-parallel
Strand 3
B
112 116parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 58first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
71 79anti-parallel
Strand 4
A
90 94anti-parallel
Strand 5
A
100 102anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 68first strand
Strand 2
C
25 32anti-parallel
Strand 3
D
112 116parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 58first strand
Strand 2
C
43 47anti-parallel
Strand 3
C
71 79anti-parallel
Strand 4
C
90 94anti-parallel
Strand 5
C
100 102anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il