Analysis of interatomic Contacts of Structural Units in PDB entry:
4MLM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MLM entry

There are 2 chains in PDB entry 4MLM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLN 189
B
 SER 2GLN 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4MLM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 19Right-handed alpha
Helix 2
2
A
31 45Right-handed alpha
Helix 3
3
A
48 58Right-handed alpha
Helix 4
4
A
65 73Right-handed alpha
Helix 5
5
A
79 92Right-handed alpha
Helix 6
6
A
94 103Right-handed alpha
Helix 7
7
A
103 115Right-handed alpha
Helix 8
8
A
116 122Right-handed 310
Helix 9
9
A
123 130Right-handed alpha
Helix 10
10
A
131 133Right-handed 310
Helix 11
11
A
138 148Right-handed alpha
Helix 12
12
A
150 164Right-handed alpha
Helix 13
13
A
173 176Right-handed 310
Helix 14
14
A
177 188Right-handed alpha
Helix 15
15
B
4 19Right-handed alpha
Helix 16
16
B
31 45Right-handed alpha
Helix 17
17
B
48 58Right-handed alpha
Helix 18
18
B
65 73Right-handed alpha
Helix 19
19
B
79 92Right-handed alpha
Helix 20
20
B
94 103Right-handed alpha
Helix 21
21
B
103 115Right-handed alpha
Helix 22
22
B
117 122Right-handed 310
Helix 23
23
B
123 130Right-handed alpha
Helix 24
24
B
131 133Right-handed 310
Helix 25
25
B
138 147Right-handed alpha
Helix 26
26
B
150 164Right-handed alpha
Helix 27
27
B
173 176Right-handed 310
Helix 28
28
B
177 188Right-handed alpha
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There are 2 sheets in PDB entry 4MLM. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
29 30anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
29 30anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il