Analysis of interatomic Contacts of Structural Units in PDB entry:
4MLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MLP entry

There are 4 chains in PDB entry 4MLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 21TYR 512
A
 ALA 21TYR 512
B
 ALA 21TYR 512
D
 ALA 21TYR 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 4MLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
36 44Right-handed alpha
Helix 2
2
C
58 62Right-handed 310
Helix 3
3
C
66 86Right-handed alpha
Helix 4
4
C
97 110Right-handed alpha
Helix 5
5
C
121 138Right-handed alpha
Helix 6
6
C
152 160Right-handed alpha
Helix 7
7
C
167 177Right-handed alpha
Helix 8
8
C
189 195Right-handed alpha
Helix 9
9
C
203 209Right-handed alpha
Helix 10
10
C
231 243Right-handed alpha
Helix 11
11
C
244 252Right-handed alpha
Helix 12
12
C
258 263Right-handed 310
Helix 13
13
C
269 275Right-handed alpha
Helix 14
14
C
279 295Right-handed alpha
Helix 15
15
C
301 304Right-handed 310
Helix 16
16
C
305 319Right-handed alpha
Helix 17
17
C
341 351Right-handed alpha
Helix 18
18
C
355 369Right-handed alpha
Helix 19
19
C
372 384Right-handed alpha
Helix 20
20
C
391 403Right-handed alpha
Helix 21
21
C
407 419Right-handed alpha
Helix 22
22
C
434 441Right-handed alpha
Helix 23
23
C
444 451Right-handed alpha
Helix 24
24
C
452 455Right-handed 310
Helix 25
25
C
458 463Right-handed alpha
Helix 26
26
C
464 468Right-handed 310
Helix 27
27
C
469 476Right-handed alpha
Helix 28
28
C
490 508Right-handed alpha
Helix 29
29
A
36 44Right-handed alpha
Helix 30
30
A
58 62Right-handed 310
Helix 31
31
A
66 87Right-handed alpha
Helix 32
32
A
97 110Right-handed alpha
Helix 33
33
A
121 138Right-handed alpha
Helix 34
34
A
152 160Right-handed alpha
Helix 35
35
A
167 177Right-handed alpha
Helix 36
36
A
189 194Right-handed alpha
Helix 37
37
A
203 209Right-handed alpha
Helix 38
38
A
212 217Right-handed alpha
Helix 39
39
A
231 243Right-handed alpha
Helix 40
40
A
244 252Right-handed alpha
Helix 41
41
A
258 263Right-handed 310
Helix 42
42
A
269 275Right-handed alpha
Helix 43
43
A
279 295Right-handed alpha
Helix 44
44
A
301 304Right-handed 310
Helix 45
45
A
305 320Right-handed alpha
Helix 46
46
A
341 350Right-handed alpha
Helix 47
47
A
355 369Right-handed alpha
Helix 48
48
A
372 384Right-handed alpha
Helix 49
49
A
391 403Right-handed alpha
Helix 50
50
A
407 419Right-handed alpha
Helix 51
51
A
434 441Right-handed alpha
Helix 52
52
A
444 451Right-handed alpha
Helix 53
53
A
452 455Right-handed 310
Helix 54
54
A
464 468Right-handed 310
Helix 55
55
A
469 477Right-handed alpha
Helix 56
56
A
490 508Right-handed alpha
Helix 57
57
B
36 44Right-handed alpha
Helix 58
58
B
58 62Right-handed 310
Helix 59
59
B
66 86Right-handed alpha
Helix 60
60
B
97 110Right-handed alpha
Helix 61
61
B
121 138Right-handed alpha
Helix 62
62
B
152 160Right-handed alpha
Helix 63
63
B
167 177Right-handed alpha
Helix 64
64
B
189 196Right-handed alpha
Helix 65
65
B
203 209Right-handed alpha
Helix 66
66
B
212 217Right-handed alpha
Helix 67
67
B
231 243Right-handed alpha
Helix 68
68
B
244 252Right-handed alpha
Helix 69
69
B
258 263Right-handed 310
Helix 70
70
B
269 275Right-handed alpha
Helix 71
71
B
279 295Right-handed alpha
Helix 72
72
B
301 304Right-handed 310
Helix 73
73
B
305 319Right-handed alpha
Helix 74
74
B
341 351Right-handed alpha
Helix 75
75
B
355 369Right-handed alpha
Helix 76
76
B
372 384Right-handed alpha
Helix 77
77
B
391 403Right-handed alpha
Helix 78
78
B
407 419Right-handed alpha
Helix 79
79
B
434 441Right-handed alpha
Helix 80
80
B
444 451Right-handed alpha
Helix 81
81
B
452 455Right-handed 310
Helix 82
82
B
464 468Right-handed 310
Helix 83
83
B
469 477Right-handed alpha
Helix 84
84
B
490 508Right-handed alpha
Helix 85
85
D
36 44Right-handed alpha
Helix 86
86
D
58 62Right-handed 310
Helix 87
87
D
66 86Right-handed alpha
Helix 88
88
D
97 110Right-handed alpha
Helix 89
89
D
121 138Right-handed alpha
Helix 90
90
D
152 160Right-handed alpha
Helix 91
91
D
167 177Right-handed alpha
Helix 92
92
D
189 196Right-handed alpha
Helix 93
93
D
203 209Right-handed alpha
Helix 94
94
D
212 217Right-handed alpha
Helix 95
95
D
231 243Right-handed alpha
Helix 96
96
D
244 252Right-handed alpha
Helix 97
97
D
258 263Right-handed 310
Helix 98
98
D
269 275Right-handed alpha
Helix 99
99
D
279 296Right-handed alpha
Helix 100
100
D
301 304Right-handed 310
Helix 101
101
D
305 319Right-handed alpha
Helix 102
102
D
341 351Right-handed alpha
Helix 103
103
D
355 369Right-handed alpha
Helix 104
104
D
372 384Right-handed alpha
Helix 105
105
D
391 403Right-handed alpha
Helix 106
106
D
407 419Right-handed alpha
Helix 107
107
D
434 441Right-handed alpha
Helix 108
108
D
444 451Right-handed alpha
Helix 109
109
D
452 455Right-handed 310
Helix 110
110
D
458 463Right-handed alpha
Helix 111
111
D
464 468Right-handed 310
Helix 112
112
D
469 477Right-handed alpha
Helix 113
113
D
490 508Right-handed alpha
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There are 4 sheets in PDB entry 4MLP. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 95first strand
Strand 2
C
48 55parallel
Strand 3
C
22 26parallel
Strand 4
C
113 117parallel
Strand 5
C
141 145parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
48 55parallel
Strand 3
A
22 26parallel
Strand 4
A
113 117parallel
Strand 5
A
141 145parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
48 55parallel
Strand 3
B
22 27parallel
Strand 4
B
113 117parallel
Strand 5
B
141 145parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
91 95first strand
Strand 2
D
48 55parallel
Strand 3
D
22 27parallel
Strand 4
D
113 117parallel
Strand 5
D
141 145parallel
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