Analysis of interatomic Contacts of Structural Units in PDB entry:
4MLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MLV entry

There is 1 chain in PDB entry 4MLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1ASP 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4MLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 27Right-handed alpha
Helix 2
2
A
62 70Right-handed alpha
Helix 3
3
A
81 83Right-handed 310
Helix 4
4
A
113 117Right-handed 310
Helix 5
5
A
127 138Right-handed alpha
Helix 6
6
A
149 160Right-handed alpha
Helix 7
7
A
169 175Right-handed alpha
Helix 8
8
A
208 217Right-handed alpha
Helix 9
9
A
220 237Right-handed alpha
Helix 10
10
A
280 296Right-handed alpha
Helix 11
11
A
296 307Right-handed alpha
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There are 3 sheets in PDB entry 4MLV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
2 8parallel
Strand 3
A
75 79parallel
Strand 4
A
200 205anti-parallel
Strand 5
A
91 95anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
121 124parallel
Strand 3
A
164 168parallel
Strand 4
A
104 108anti-parallel
Strand 5
A
184 185anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 251first strand
Strand 2
A
257 264anti-parallel
Strand 3
A
271 278anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il