Analysis of interatomic Contacts of Structural Units in PDB entry:
4MLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MLZ entry

There are 2 chains in PDB entry 4MLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 55VAL 353
B
 GLU 56GLU 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4MLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
84 94Right-handed alpha
Helix 2
2
A
96 98Right-handed 310
Helix 3
3
A
111 113Right-handed 310
Helix 4
4
A
114 120Right-handed alpha
Helix 5
5
A
121 126Right-handed alpha
Helix 6
6
A
134 140Right-handed alpha
Helix 7
7
A
150 155Right-handed 310
Helix 8
8
A
161 168Right-handed alpha
Helix 9
9
A
176 179Right-handed 310
Helix 10
10
A
190 205Right-handed alpha
Helix 11
11
A
207 224Right-handed alpha
Helix 12
12
A
251 261Right-handed alpha
Helix 13
13
A
277 285Right-handed alpha
Helix 14
14
A
298 309Right-handed alpha
Helix 15
15
A
311 314Right-handed 310
Helix 16
16
A
315 320Right-handed alpha
Helix 17
17
A
329 332Right-handed 310
Helix 18
18
A
334 350Right-handed alpha
Helix 19
19
B
84 94Right-handed alpha
Helix 20
20
B
96 98Right-handed 310
Helix 21
21
B
111 113Right-handed 310
Helix 22
22
B
114 119Right-handed alpha
Helix 23
23
B
121 126Right-handed alpha
Helix 24
24
B
134 140Right-handed alpha
Helix 25
25
B
150 155Right-handed 310
Helix 26
26
B
161 168Right-handed alpha
Helix 27
27
B
176 179Right-handed 310
Helix 28
28
B
190 205Right-handed alpha
Helix 29
29
B
207 225Right-handed alpha
Helix 30
30
B
251 261Right-handed alpha
Helix 31
31
B
277 285Right-handed alpha
Helix 32
32
B
298 309Right-handed alpha
Helix 33
33
B
311 314Right-handed 310
Helix 34
34
B
315 320Right-handed alpha
Helix 35
35
B
329 332Right-handed 310
Helix 36
36
B
335 351Right-handed alpha
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There are 8 sheets in PDB entry 4MLZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
69 73anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
80 83parallel
Strand 3
A
145 148parallel
Strand 4
A
171 174parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 264first strand
Strand 2
A
233 239parallel
Strand 3
A
245 247anti-parallel
Strand 4
A
273 275anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 264first strand
Strand 2
A
233 239parallel
Strand 3
A
288 293parallel
Strand 4
A
323 327parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
69 73anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
80 83parallel
Strand 3
B
145 148parallel
Strand 4
B
171 174parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 264first strand
Strand 2
B
233 239parallel
Strand 3
B
245 247anti-parallel
Strand 4
B
273 275anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 264first strand
Strand 2
B
233 239parallel
Strand 3
B
288 293parallel
Strand 4
B
323 327parallel
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