Analysis of interatomic Contacts of Structural Units in PDB entry:
4MM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MM0 entry

There are 2 chains in PDB entry 4MM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 5TRP 396
B
 ALA 3TRP 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4MM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 31Right-handed alpha
Helix 2
2
A
49 59Right-handed alpha
Helix 3
3
A
88 98Right-handed alpha
Helix 4
4
A
99 101Right-handed 310
Helix 5
5
A
102 108Right-handed alpha
Helix 6
6
A
109 128Right-handed alpha
Helix 7
7
A
133 137Right-handed alpha
Helix 8
8
A
139 151Right-handed alpha
Helix 9
9
A
153 155Right-handed 310
Helix 10
10
A
156 168Right-handed alpha
Helix 11
11
A
174 199Right-handed alpha
Helix 12
12
A
203 214Right-handed alpha
Helix 13
13
A
219 252Right-handed alpha
Helix 14
14
A
252 262Right-handed alpha
Helix 15
15
A
265 277Right-handed alpha
Helix 16
16
A
308 314Right-handed alpha
Helix 17
17
A
346 365Right-handed alpha
Helix 18
18
A
373 377Right-handed 310
Helix 19
19
B
21 31Right-handed alpha
Helix 20
20
B
49 59Right-handed alpha
Helix 21
21
B
88 99Right-handed alpha
Helix 22
22
B
102 108Right-handed alpha
Helix 23
23
B
109 128Right-handed alpha
Helix 24
24
B
133 137Right-handed alpha
Helix 25
25
B
139 151Right-handed alpha
Helix 26
26
B
153 155Right-handed 310
Helix 27
27
B
156 168Right-handed alpha
Helix 28
28
B
174 199Right-handed alpha
Helix 29
29
B
203 215Right-handed alpha
Helix 30
30
B
219 252Right-handed alpha
Helix 31
31
B
252 262Right-handed alpha
Helix 32
32
B
265 277Right-handed alpha
Helix 33
33
B
308 313Right-handed alpha
Helix 34
34
B
346 365Right-handed alpha
Helix 35
35
B
373 377Right-handed 310
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There are 6 sheets in PDB entry 4MM0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
33 37parallel
Strand 3
A
43 47anti-parallel
Strand 4
A
304 307parallel
Strand 5
A
284 288anti-parallel
Strand 6
A
62 63anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
393 395anti-parallel
Strand 3
A
369 370anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 294first strand
Strand 2
A
297 299anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
33 37parallel
Strand 3
B
43 47anti-parallel
Strand 4
B
304 307parallel
Strand 5
B
284 288anti-parallel
Strand 6
B
62 63anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
393 395anti-parallel
Strand 3
B
369 370anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 294first strand
Strand 2
B
297 299anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il