Analysis of interatomic Contacts of Structural Units in PDB entry:
4MM1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MM1 entry

There are 3 chains in PDB entry 4MM1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2GLY 246
B
 LYS 5GLY 225
C
 MET 1GLY 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 4MM1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 15Right-handed alpha
Helix 2
2
A
25 29Right-handed 310
Helix 3
3
A
30 44Right-handed alpha
Helix 4
4
A
57 72Right-handed alpha
Helix 5
5
A
82 86Right-handed 310
Helix 6
6
A
103 108Right-handed alpha
Helix 7
7
A
108 121Right-handed alpha
Helix 8
8
A
136 143Right-handed alpha
Helix 9
9
A
152 166Right-handed alpha
Helix 10
10
A
184 195Right-handed alpha
Helix 11
11
A
207 218Right-handed alpha
Helix 12
12
A
236 245Right-handed alpha
Helix 13
13
B
6 15Right-handed alpha
Helix 14
14
B
25 29Right-handed 310
Helix 15
15
B
30 38Right-handed alpha
Helix 16
16
B
57 72Right-handed alpha
Helix 17
17
B
82 86Right-handed 310
Helix 18
18
B
103 108Right-handed alpha
Helix 19
19
B
108 121Right-handed alpha
Helix 20
20
B
136 143Right-handed alpha
Helix 21
21
B
152 166Right-handed alpha
Helix 22
22
B
187 195Right-handed alpha
Helix 23
23
B
207 218Right-handed alpha
Helix 24
24
C
5 15Right-handed alpha
Helix 25
26
C
59 72Right-handed alpha
Helix 26
27
C
82 86Right-handed 310
Helix 27
28
C
103 108Right-handed alpha
Helix 28
29
C
108 121Right-handed alpha
Helix 29
30
C
136 143Right-handed alpha
Helix 30
31
C
152 166Right-handed alpha
Helix 31
32
C
184 195Right-handed alpha
Helix 32
33
C
207 218Right-handed alpha
Helix 33
34
C
237 247Right-handed alpha
Helix 34
35
D
5 15Right-handed alpha
Helix 35
36
D
25 29Right-handed 310
Helix 36
37
D
35 45Right-handed alpha
Helix 37
38
D
57 72Right-handed alpha
Helix 38
39
D
82 86Right-handed 310
Helix 39
40
D
103 108Right-handed alpha
Helix 40
41
D
108 121Right-handed alpha
Helix 41
42
D
136 143Right-handed alpha
Helix 42
43
D
152 166Right-handed alpha
Helix 43
44
D
184 195Right-handed alpha
Helix 44
45
D
207 218Right-handed alpha
Helix 45
46
E
5 15Right-handed alpha
Helix 46
47
E
25 29Right-handed 310
Helix 47
48
E
30 43Right-handed alpha
Helix 48
49
E
57 72Right-handed alpha
Helix 49
50
E
82 86Right-handed 310
Helix 50
51
E
103 108Right-handed alpha
Helix 51
52
E
108 121Right-handed alpha
Helix 52
53
E
136 143Right-handed alpha
Helix 53
54
E
152 166Right-handed alpha
Helix 54
55
E
184 195Right-handed alpha
Helix 55
56
E
207 218Right-handed alpha
Helix 56
57
F
5 15Right-handed alpha
Helix 57
58
F
34 44Right-handed alpha
Helix 58
59
F
82 86Right-handed 310
Helix 59
60
F
103 108Right-handed alpha
Helix 60
61
F
108 121Right-handed alpha
Helix 61
62
F
136 143Right-handed alpha
Helix 62
63
F
152 166Right-handed alpha
Helix 63
64
F
184 195Right-handed alpha
Helix 64
65
F
207 218Right-handed alpha
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There are 6 sheets in PDB entry 4MM1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 24first strand
Strand 2
A
49 52parallel
Strand 3
A
76 79parallel
Strand 4
A
92 98parallel
Strand 5
A
124 132parallel
Strand 6
A
170 174parallel
Strand 7
A
198 202parallel
Strand 8
A
221 224parallel
Strand 9
A
19 24parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 24first strand
Strand 2
B
49 52parallel
Strand 3
B
76 79parallel
Strand 4
B
92 98parallel
Strand 5
B
124 132parallel
Strand 6
B
170 174parallel
Strand 7
B
198 201parallel
Strand 8
B
221 224parallel
Strand 9
B
19 24parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 24first strand
Strand 2
C
49 52parallel
Strand 3
C
76 79parallel
Strand 4
C
92 98parallel
Strand 5
C
124 132parallel
Strand 6
C
170 174parallel
Strand 7
C
198 202parallel
Strand 8
C
221 224parallel
Strand 9
C
19 24parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
20 24first strand
Strand 2
D
49 52parallel
Strand 3
D
76 79parallel
Strand 4
D
92 98parallel
Strand 5
D
124 132parallel
Strand 6
D
170 174parallel
Strand 7
D
198 202parallel
Strand 8
D
221 224parallel
Strand 9
D
20 24parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
19 24first strand
Strand 2
E
49 52parallel
Strand 3
E
76 79parallel
Strand 4
E
92 98parallel
Strand 5
E
124 132parallel
Strand 6
E
170 174parallel
Strand 7
E
198 202parallel
Strand 8
E
221 224parallel
Strand 9
E
19 24parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
19 24first strand
Strand 2
F
49 51parallel
Strand 3
F
76 78parallel
Strand 4
F
92 98parallel
Strand 5
F
124 132parallel
Strand 6
F
170 174parallel
Strand 7
F
198 202parallel
Strand 8
F
221 224parallel
Strand 9
F
19 24parallel
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