Analysis of interatomic Contacts of Structural Units in PDB entry:
4MN4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4MN4 entry

There are 4 chains in PDB entry 4MN4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 497	PRO 742
C	ASN 643	LEU 804
D	GLU 645	PHE 801
B	GLU 498	PRO 742

There are 28 helices in PDB entry 4MN4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	556	560	Right-handed 310
Helix 2	2	A	571	573	Right-handed 310
Helix 3	3	A	608	612	Right-handed alpha
Helix 4	4	A	658	660	Right-handed 310
Helix 5	5	A	675	681	Right-handed alpha
Helix 6	6	A	710	718	Right-handed alpha
Helix 7	7	C	644	665	Right-handed alpha
Helix 8	8	C	672	682	Right-handed alpha
Helix 9	9	C	686	690	Right-handed alpha
Helix 10	10	C	697	705	Right-handed alpha
Helix 11	11	C	706	710	Right-handed 310
Helix 12	12	C	716	719	Right-handed 310
Helix 13	13	C	720	725	Right-handed alpha
Helix 14	14	C	779	804	Right-handed alpha
Helix 15	15	D	647	664	Right-handed alpha
Helix 16	16	D	672	681	Right-handed alpha
Helix 17	17	D	686	690	Right-handed alpha
Helix 18	18	D	697	705	Right-handed alpha
Helix 19	19	D	706	710	Right-handed 310
Helix 20	20	D	717	725	Right-handed alpha
Helix 21	21	D	779	801	Right-handed alpha
Helix 22	22	B	519	523	Right-handed 310
Helix 23	23	B	556	560	Right-handed 310
Helix 24	24	B	571	573	Right-handed 310
Helix 25	25	B	608	612	Right-handed alpha
Helix 26	26	B	658	660	Right-handed 310
Helix 27	27	B	675	680	Right-handed alpha
Helix 28	28	B	710	717	Right-handed alpha

There are 12 sheets in PDB entry 4MN4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	531	538	first strand
Strand 2	A	499	505	anti-parallel
Strand 3	A	509	514	anti-parallel
Strand 4	A	568	569	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	586	first strand
Strand 2	A	543	547	anti-parallel
Strand 3	A	551	555	anti-parallel
Strand 4	A	619	620	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	634	635	first strand
Strand 2	A	593	598	anti-parallel
Strand 3	A	602	607	anti-parallel
Strand 4	A	669	670	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	686	692	first strand
Strand 2	A	642	647	anti-parallel
Strand 3	A	651	656	anti-parallel
Strand 4	A	726	727	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	740	first strand
Strand 2	A	697	702	anti-parallel
Strand 3	A	705	709	anti-parallel
Strand 4	C	744	745	parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	684	685	first strand
Strand 2	C	712	714	anti-parallel
Strand 3	C	734	738	parallel
Strand 4	D	766	771	anti-parallel
Strand 5	D	757	763	anti-parallel
Strand 6	D	751	754	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	751	753	first strand
Strand 2	C	757	763	anti-parallel
Strand 3	C	766	771	anti-parallel
Strand 4	D	734	738	anti-parallel
Strand 5	D	712	714	parallel
Strand 6	D	684	685	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	744	745	first strand
Strand 2	B	705	709	parallel
Strand 3	B	697	702	anti-parallel
Strand 4	B	736	740	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	538	first strand
Strand 2	B	499	505	anti-parallel
Strand 3	B	509	514	anti-parallel
Strand 4	B	568	569	anti-parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	582	586	first strand
Strand 2	B	543	547	anti-parallel
Strand 3	B	551	555	anti-parallel
Strand 4	B	619	620	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	634	635	first strand
Strand 2	B	593	597	anti-parallel
Strand 3	B	602	607	anti-parallel
Strand 4	B	669	670	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	686	692	first strand
Strand 2	B	642	647	anti-parallel
Strand 3	B	651	656	anti-parallel
Strand 4	B	726	727	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4MN4

Analysis of interatomic Contacts of Structural Units in PDB entry:
4MN4