Analysis of interatomic Contacts of Structural Units in PDB entry:
4MN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MN8 entry

There are 3 chains in PDB entry 4MN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 26GLY 784
B
 ASN 26THR 200
C
 GLN 65ILE 85
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4MN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 39Right-handed alpha
Helix 2
2
A
49 56Right-handed alpha
Helix 3
3
A
59 63Right-handed 310
Helix 4
4
A
89 95Right-handed 310
Helix 5
5
A
113 119Right-handed 310
Helix 6
6
A
137 143Right-handed 310
Helix 7
7
A
161 167Right-handed 310
Helix 8
8
A
187 191Right-handed 310
Helix 9
9
A
209 215Right-handed 310
Helix 10
10
A
233 239Right-handed 310
Helix 11
11
A
257 263Right-handed 310
Helix 12
12
A
281 287Right-handed 310
Helix 13
13
A
305 311Right-handed 310
Helix 14
14
A
329 335Right-handed 310
Helix 15
15
A
353 359Right-handed 310
Helix 16
16
A
379 383Right-handed 310
Helix 17
17
A
401 407Right-handed 310
Helix 18
18
A
448 454Right-handed 310
Helix 19
19
A
472 478Right-handed 310
Helix 20
20
A
496 503Right-handed 310
Helix 21
21
A
520 526Right-handed 310
Helix 22
22
A
544 550Right-handed 310
Helix 23
23
A
568 574Right-handed 310
Helix 24
24
A
592 598Right-handed 310
Helix 25
25
A
616 623Right-handed alpha
Helix 26
26
A
642 646Right-handed 310
Helix 27
27
A
666 672Right-handed 310
Helix 28
28
A
690 697Right-handed alpha
Helix 29
29
A
715 721Right-handed 310
Helix 30
30
A
740 745Right-handed alpha
Helix 31
31
A
772 777Right-handed 310
Helix 32
32
B
27 38Right-handed alpha
Helix 33
33
B
44 49Right-handed 310
Helix 34
34
B
85 91Right-handed 310
Helix 35
35
B
109 115Right-handed 310
Helix 36
36
B
133 138Right-handed 310
Helix 37
37
B
157 162Right-handed 310
Helix 38
38
C
72 76Right-handed 310
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There are 7 sheets in PDB entry 4MN8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 30 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
74 78anti-parallel
Strand 3
A
100 102parallel
Strand 4
A
124 126parallel
Strand 5
A
148 150parallel
Strand 6
A
172 174parallel
Strand 7
A
196 198parallel
Strand 8
A
220 222parallel
Strand 9
A
244 246parallel
Strand 10
A
268 270parallel
Strand 11
A
292 294parallel
Strand 12
A
316 318parallel
Strand 13
A
340 342parallel
Strand 14
A
364 366parallel
Strand 15
A
388 390parallel
Strand 16
A
412 414parallel
Strand 17
A
435 437parallel
Strand 18
A
459 461parallel
Strand 19
A
483 485parallel
Strand 20
A
507 509parallel
Strand 21
A
531 533parallel
Strand 22
A
555 557parallel
Strand 23
A
579 581parallel
Strand 24
A
603 605parallel
Strand 25
A
629 631parallel
Strand 26
A
653 655parallel
Strand 27
A
677 679parallel
Strand 28
A
702 704parallel
Strand 29
A
726 728parallel
Strand 30
A
750 752parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
395 396parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
514 518parallel
Strand 3
A
538 540parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
564 566first strand
Strand 2
A
586 588parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
638 639first strand
Strand 2
A
660 661parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
81 82anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 64first strand
Strand 2
B
70 74anti-parallel
Strand 3
B
96 98parallel
Strand 4
B
120 122parallel
Strand 5
B
144 146parallel
Strand 6
B
168 169parallel
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