Analysis of interatomic Contacts of Structural Units in PDB entry:
4MNF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MNF entry

There are 2 chains in PDB entry 4MNF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 449SER 720
B
 ASP 449SER 720
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4MNF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
491 506Right-handed alpha
Helix 2
2
A
536 543Right-handed alpha
Helix 3
3
A
549 570Right-handed alpha
Helix 4
4
A
586 588Right-handed 310
Helix 5
5
A
616 620Right-handed 310
Helix 6
6
A
621 627Right-handed alpha
Helix 7
7
A
634 652Right-handed alpha
Helix 8
8
A
661 671Right-handed alpha
Helix 9
9
A
677 681Right-handed 310
Helix 10
10
A
686 697Right-handed alpha
Helix 11
11
A
700 704Right-handed 310
Helix 12
12
A
706 719Right-handed alpha
Helix 13
13
B
491 506Right-handed alpha
Helix 14
14
B
536 543Right-handed alpha
Helix 15
15
B
549 569Right-handed alpha
Helix 16
16
B
616 620Right-handed 310
Helix 17
17
B
621 627Right-handed alpha
Helix 18
18
B
634 652Right-handed alpha
Helix 19
19
B
661 671Right-handed alpha
Helix 20
20
B
677 681Right-handed 310
Helix 21
21
B
686 697Right-handed alpha
Helix 22
22
B
700 704Right-handed 310
Helix 23
23
B
706 718Right-handed alpha
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There are 4 sheets in PDB entry 4MNF. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 465first strand
Strand 2
A
470 475anti-parallel
Strand 3
A
479 484anti-parallel
Strand 4
A
526 530anti-parallel
Strand 5
A
516 520anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 585first strand
Strand 2
A
589 592anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
458 464first strand
Strand 2
B
470 475anti-parallel
Strand 3
B
479 484anti-parallel
Strand 4
B
526 530anti-parallel
Strand 5
B
516 520anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
582 585first strand
Strand 2
B
589 592anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il