Analysis of interatomic Contacts of Structural Units in PDB entry:
4MNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MNH entry

There are 4 chains in PDB entry 4MNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8ASP 246
B
 GLN 2PHE 207
C
 GLY 6ASP 246
D
 GLN 2SER 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4MNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
86 90Right-handed 310
Helix 2
2
A
118 122Right-handed 310
Helix 3
3
A
133 140Right-handed alpha
Helix 4
4
A
200 204Right-handed alpha
Helix 5
5
B
82 86Right-handed 310
Helix 6
6
C
86 90Right-handed 310
Helix 7
7
C
118 122Right-handed 310
Helix 8
8
C
133 140Right-handed alpha
Helix 9
9
C
200 204Right-handed alpha
Helix 10
10
D
82 86Right-handed 310
Helix 11
11
D
101 105Right-handed 310
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There are 22 sheets in PDB entry 4MNH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
111 116parallel
Strand 3
A
91 98anti-parallel
Strand 4
A
32 38anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
57 59anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
111 116parallel
Strand 3
A
91 98anti-parallel
Strand 4
A
105 107anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
79 82anti-parallel
Strand 3
A
68 71anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
142 152anti-parallel
Strand 3
A
190 199anti-parallel
Strand 4
A
172 174anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
142 152anti-parallel
Strand 3
A
190 199anti-parallel
Strand 4
A
179 180anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
A
157 163anti-parallel
Strand 3
A
209 216anti-parallel
Strand 4
A
235 242anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
113 118parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
33 39anti-parallel
Strand 5
B
45 52anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
113 118parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
107 109anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
73 78anti-parallel
Strand 3
B
63 68anti-parallel
Strand 4
B
59 60anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 130first strand
Strand 2
B
142 145anti-parallel
Strand 3
B
176 184anti-parallel
Strand 4
B
162 163anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 130first strand
Strand 2
B
142 145anti-parallel
Strand 3
B
176 184anti-parallel
Strand 4
B
167 171anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 14first strand
Strand 2
C
111 116parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
32 38anti-parallel
Strand 5
C
45 51anti-parallel
Strand 6
C
57 59anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 14first strand
Strand 2
C
111 116parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
105 107anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 23first strand
Strand 2
C
78 82anti-parallel
Strand 3
C
68 71anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 130first strand
Strand 2
C
142 152anti-parallel
Strand 3
C
190 199anti-parallel
Strand 4
C
172 174anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 130first strand
Strand 2
C
142 152anti-parallel
Strand 3
C
190 199anti-parallel
Strand 4
C
179 180anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
166 167first strand
Strand 2
C
157 163anti-parallel
Strand 3
C
209 216anti-parallel
Strand 4
C
235 242anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 13first strand
Strand 2
D
113 117parallel
Strand 3
D
87 94anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
45 52anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 13first strand
Strand 2
D
113 117parallel
Strand 3
D
87 94anti-parallel
Strand 4
D
107 109anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 21first strand
Strand 2
D
73 78anti-parallel
Strand 3
D
63 68anti-parallel
Strand 4
D
59 60anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 132first strand
Strand 2
D
140 145anti-parallel
Strand 3
D
177 185anti-parallel
Strand 4
D
161 163anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 132first strand
Strand 2
D
140 145anti-parallel
Strand 3
D
177 185anti-parallel
Strand 4
D
167 170anti-parallel
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