Analysis of interatomic Contacts of Structural Units in PDB entry:
4MNK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MNK entry

There is 1 chain in PDB entry 4MNK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3GLY 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4MNK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 14Right-handed 310
Helix 2
2
A
18 22Right-handed 310
Helix 3
3
A
23 27Right-handed 310
Helix 4
4
A
50 63Right-handed alpha
Helix 5
5
A
78 90Right-handed alpha
Helix 6
6
A
91 110Right-handed alpha
Helix 7
7
A
123 149Right-handed alpha
Helix 8
8
A
175 183Right-handed alpha
Helix 9
9
A
215 227Right-handed alpha
Helix 10
10
A
229 231Right-handed 310
Helix 11
11
A
270 279Right-handed alpha
Helix 12
12
A
305 319Right-handed alpha
Helix 13
13
A
329 332Right-handed 310
Helix 14
14
A
335 346Right-handed alpha
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There are 4 sheets in PDB entry 4MNK. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
29 35parallel
Strand 3
A
69 76parallel
Strand 4
A
113 118parallel
Strand 5
A
154 160parallel
Strand 6
A
185 189parallel
Strand 7
A
233 238parallel
Strand 8
A
323 327parallel
Strand 9
A
4 10parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
172 173anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
240 246anti-parallel
Strand 3
A
267 269anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
240 246anti-parallel
Strand 3
A
299 303anti-parallel
Strand 4
A
291 296anti-parallel
Strand 5
A
282 286anti-parallel
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