Analysis of interatomic Contacts of Structural Units in PDB entry:
4MP6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MP6 entry

There is 1 chain in PDB entry 4MP6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3TYR 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4MP6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
21 37Right-handed alpha
Helix 3
3
A
85 91Right-handed alpha
Helix 4
4
A
115 135Right-handed alpha
Helix 5
5
A
148 162Right-handed alpha
Helix 6
6
A
174 189Right-handed alpha
Helix 7
7
A
199 206Right-handed alpha
Helix 8
8
A
222 226Right-handed 310
Helix 9
9
A
241 248Right-handed alpha
Helix 10
10
A
264 272Right-handed alpha
Helix 11
11
A
284 289Right-handed alpha
Helix 12
12
A
309 327Right-handed alpha
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There are 3 sheets in PDB entry 4MP6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
60 68anti-parallel
Strand 3
A
47 48anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
60 68anti-parallel
Strand 3
A
74 82anti-parallel
Strand 4
A
95 102anti-parallel
Strand 5
A
109 114anti-parallel
Strand 6
A
4 8parallel
Strand 7
A
331 334anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 196first strand
Strand 2
A
167 171parallel
Strand 3
A
141 145parallel
Strand 4
A
209 212parallel
Strand 5
A
231 233parallel
Strand 6
A
302 305parallel
Strand 7
A
250 253parallel
Strand 8
A
282 283parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il