Analysis of interatomic Contacts of Structural Units in PDB entry:
4MPF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MPF entry

There are 2 chains in PDB entry 4MPF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2PRO 244
B
 TYR -3PRO 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4MPF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
38 41Right-handed 310
Helix 3
3
A
42 47Right-handed alpha
Helix 4
4
A
66 78Right-handed alpha
Helix 5
5
A
81 85Right-handed 310
Helix 6
6
A
88 106Right-handed alpha
Helix 7
7
A
111 118Right-handed alpha
Helix 8
8
A
118 123Right-handed alpha
Helix 9
9
A
128 149Right-handed alpha
Helix 10
10
A
163 178Right-handed alpha
Helix 11
11
A
187 202Right-handed alpha
Helix 12
12
A
202 215Right-handed alpha
Helix 13
13
A
215 222Right-handed alpha
Helix 14
14
A
229 242Right-handed alpha
Helix 15
15
B
11 24Right-handed alpha
Helix 16
16
B
38 41Right-handed 310
Helix 17
17
B
42 49Right-handed alpha
Helix 18
18
B
66 78Right-handed alpha
Helix 19
19
B
81 85Right-handed 310
Helix 20
20
B
88 106Right-handed alpha
Helix 21
21
B
111 118Right-handed alpha
Helix 22
22
B
118 123Right-handed alpha
Helix 23
23
B
128 149Right-handed alpha
Helix 24
24
B
163 179Right-handed alpha
Helix 25
25
B
187 202Right-handed alpha
Helix 26
26
B
202 222Right-handed alpha
Helix 27
27
B
229 242Right-handed alpha
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There are 2 sheets in PDB entry 4MPF. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
3 7parallel
Strand 3
A
56 59anti-parallel
Strand 4
A
62 65anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
4 7parallel
Strand 3
B
56 59anti-parallel
Strand 4
B
62 65anti-parallel
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