Analysis of interatomic Contacts of Structural Units in PDB entry:
4MPT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MPT entry

There are 2 chains in PDB entry 4MPT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ILE 375
B
 ASP 2ILE 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4MPT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 37Right-handed alpha
Helix 2
2
A
56 70Right-handed alpha
Helix 3
3
A
81 96Right-handed alpha
Helix 4
4
A
106 110Right-handed 310
Helix 5
5
A
130 146Right-handed alpha
Helix 6
6
A
156 173Right-handed alpha
Helix 7
7
A
191 201Right-handed alpha
Helix 8
8
A
211 225Right-handed alpha
Helix 9
9
A
235 238Right-handed 310
Helix 10
10
A
239 247Right-handed alpha
Helix 11
11
A
248 251Right-handed 310
Helix 12
12
A
266 281Right-handed alpha
Helix 13
13
A
296 301Right-handed alpha
Helix 14
14
A
301 319Right-handed alpha
Helix 15
15
A
322 333Right-handed alpha
Helix 16
16
A
354 356Right-handed 310
Helix 17
17
B
16 36Right-handed alpha
Helix 18
18
B
56 69Right-handed alpha
Helix 19
19
B
81 96Right-handed alpha
Helix 20
20
B
106 110Right-handed 310
Helix 21
21
B
130 146Right-handed alpha
Helix 22
22
B
156 173Right-handed alpha
Helix 23
23
B
191 200Right-handed alpha
Helix 24
24
B
211 225Right-handed alpha
Helix 25
25
B
235 238Right-handed 310
Helix 26
26
B
239 247Right-handed alpha
Helix 27
27
B
248 251Right-handed 310
Helix 28
28
B
266 281Right-handed alpha
Helix 29
29
B
296 301Right-handed alpha
Helix 30
30
B
301 319Right-handed alpha
Helix 31
31
B
322 331Right-handed alpha
Helix 32
32
B
354 356Right-handed 310
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There are 6 sheets in PDB entry 4MPT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 52first strand
Strand 2
A
3 10parallel
Strand 3
A
73 77parallel
Strand 4
A
99 101parallel
Strand 5
A
124 126parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 184first strand
Strand 2
A
149 154parallel
Strand 3
A
205 209parallel
Strand 4
A
231 233parallel
Strand 5
A
253 258parallel
Strand 6
A
358 365anti-parallel
Strand 7
A
370 374anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
342 343anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 52first strand
Strand 2
B
3 10parallel
Strand 3
B
76 77parallel
Strand 4
B
99 101parallel
Strand 5
B
124 126parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 184first strand
Strand 2
B
149 154parallel
Strand 3
B
205 209parallel
Strand 4
B
231 233parallel
Strand 5
B
254 258parallel
Strand 6
B
358 365anti-parallel
Strand 7
B
370 374anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 337first strand
Strand 2
B
342 343anti-parallel
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