Analysis of interatomic Contacts of Structural Units in PDB entry:
4MTJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MTJ entry

There are 2 chains in PDB entry 4MTJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2MET 787
B
 ILE 2MET 787
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 4MTJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
29 41Right-handed alpha
Helix 3
3
A
46 62Right-handed alpha
Helix 4
4
A
91 98Right-handed alpha
Helix 5
5
A
100 104Right-handed 310
Helix 6
6
A
112 126Right-handed alpha
Helix 7
7
A
130 139Right-handed alpha
Helix 8
8
A
140 148Right-handed alpha
Helix 9
9
A
154 160Right-handed alpha
Helix 10
10
A
168 191Right-handed alpha
Helix 11
11
A
197 231Right-handed alpha
Helix 12
12
A
235 253Right-handed alpha
Helix 13
13
A
259 278Right-handed alpha
Helix 14
14
A
287 299Right-handed alpha
Helix 15
15
A
303 319Right-handed alpha
Helix 16
16
A
328 333Right-handed alpha
Helix 17
17
A
356 370Right-handed alpha
Helix 18
18
A
385 398Right-handed alpha
Helix 19
19
A
408 418Right-handed alpha
Helix 20
20
A
421 427Right-handed alpha
Helix 21
21
A
453 462Right-handed alpha
Helix 22
22
A
477 481Right-handed 310
Helix 23
23
A
483 517Right-handed alpha
Helix 24
24
A
519 524Right-handed alpha
Helix 25
25
A
528 533Right-handed alpha
Helix 26
26
A
535 539Right-handed 310
Helix 27
27
A
552 567Right-handed alpha
Helix 28
28
A
574 584Right-handed alpha
Helix 29
29
A
589 599Right-handed alpha
Helix 30
30
A
606 625Right-handed alpha
Helix 31
31
A
643 651Right-handed alpha
Helix 32
32
A
679 688Right-handed alpha
Helix 33
33
A
706 710Right-handed 310
Helix 34
34
A
711 729Right-handed alpha
Helix 35
35
A
740 750Right-handed alpha
Helix 36
36
A
751 754Right-handed 310
Helix 37
37
A
769 771Right-handed 310
Helix 38
38
A
772 781Right-handed alpha
Helix 39
39
B
10 22Right-handed alpha
Helix 40
40
B
29 42Right-handed alpha
Helix 41
41
B
46 62Right-handed alpha
Helix 42
42
B
91 98Right-handed alpha
Helix 43
43
B
100 104Right-handed 310
Helix 44
44
B
112 126Right-handed alpha
Helix 45
45
B
130 139Right-handed alpha
Helix 46
46
B
140 148Right-handed alpha
Helix 47
47
B
154 160Right-handed alpha
Helix 48
48
B
168 191Right-handed alpha
Helix 49
49
B
197 232Right-handed alpha
Helix 50
50
B
235 253Right-handed alpha
Helix 51
51
B
259 278Right-handed alpha
Helix 52
52
B
287 299Right-handed alpha
Helix 53
53
B
303 319Right-handed alpha
Helix 54
54
B
328 333Right-handed alpha
Helix 55
55
B
356 370Right-handed alpha
Helix 56
56
B
385 398Right-handed alpha
Helix 57
57
B
408 418Right-handed alpha
Helix 58
58
B
421 427Right-handed alpha
Helix 59
59
B
453 462Right-handed alpha
Helix 60
60
B
477 481Right-handed 310
Helix 61
61
B
483 517Right-handed alpha
Helix 62
62
B
519 524Right-handed alpha
Helix 63
63
B
528 533Right-handed alpha
Helix 64
64
B
535 539Right-handed 310
Helix 65
65
B
552 567Right-handed alpha
Helix 66
66
B
574 584Right-handed alpha
Helix 67
67
B
589 598Right-handed alpha
Helix 68
68
B
606 625Right-handed alpha
Helix 69
69
B
643 651Right-handed alpha
Helix 70
70
B
679 688Right-handed alpha
Helix 71
71
B
706 710Right-handed 310
Helix 72
72
B
711 729Right-handed alpha
Helix 73
73
B
740 750Right-handed alpha
Helix 74
74
B
751 754Right-handed 310
Helix 75
75
B
769 771Right-handed 310
Helix 76
76
B
772 781Right-handed alpha
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There are 12 sheets in PDB entry 4MTJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 153first strand
Strand 2
A
449 452anti-parallel
Strand 3
A
548 551parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 344first strand
Strand 2
A
375 380parallel
Strand 3
A
404 407parallel
Strand 4
A
733 738anti-parallel
Strand 5
A
702 705parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 431first strand
Strand 2
A
435 437anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 443first strand
Strand 2
A
543 546parallel
Strand 3
A
634 635parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 466first strand
Strand 2
A
469 470anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 760first strand
Strand 2
A
765 767anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 153first strand
Strand 2
B
449 452anti-parallel
Strand 3
B
548 551parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 344first strand
Strand 2
B
375 380parallel
Strand 3
B
404 407parallel
Strand 4
B
733 738anti-parallel
Strand 5
B
702 705parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
429 431first strand
Strand 2
B
435 437anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
442 443first strand
Strand 2
B
543 546parallel
Strand 3
B
634 635parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
465 466first strand
Strand 2
B
469 470anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
758 760first strand
Strand 2
B
765 767anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il