Analysis of interatomic Contacts of Structural Units in PDB entry:
4MTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MTL entry

There are 2 chains in PDB entry 4MTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 57ASP 264
B
 SER 45TRP 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4MTL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
86 90Right-handed 310
Helix 2
2
A
92 110Right-handed alpha
Helix 3
3
A
124 133Right-handed alpha
Helix 4
4
A
145 158Right-handed alpha
Helix 5
5
A
175 180Right-handed alpha
Helix 6
6
A
201 213Right-handed alpha
Helix 7
7
A
227 240Right-handed alpha
Helix 8
8
B
51 57Right-handed alpha
Helix 9
9
B
62 66Right-handed 310
Helix 10
10
B
92 105Right-handed alpha
Helix 11
11
B
105 110Right-handed alpha
Helix 12
12
B
124 133Right-handed alpha
Helix 13
13
B
142 158Right-handed alpha
Helix 14
14
B
175 180Right-handed alpha
Helix 15
15
B
201 213Right-handed alpha
Helix 16
16
B
227 240Right-handed alpha
Helix 17
17
B
250 252Right-handed 310
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There are 4 sheets in PDB entry 4MTL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 73first strand
Strand 2
A
76 82anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
136 141parallel
Strand 3
A
115 118parallel
Strand 4
A
189 193parallel
Strand 5
A
218 224parallel
Strand 6
A
254 261anti-parallel
Strand 7
A
241 249anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 73first strand
Strand 2
B
76 82anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 169first strand
Strand 2
B
136 141parallel
Strand 3
B
115 118parallel
Strand 4
B
189 193parallel
Strand 5
B
218 224parallel
Strand 6
B
254 261anti-parallel
Strand 7
B
241 249anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il