Analysis of interatomic Contacts of Structural Units in PDB entry:
4MTP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MTP entry

There are 4 chains in PDB entry 4MTP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 276THR 889
B
 GLN 276THR 889
C
 GLN 276THR 889
D
 GLN 276THR 889
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are122 helices in PDB entry 4MTP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
279 290Right-handed alpha
Helix 2
2
A
324 331Right-handed alpha
Helix 3
3
A
332 336Right-handed 310
Helix 4
4
A
337 342Right-handed alpha
Helix 5
5
A
349 361Right-handed alpha
Helix 6
6
A
369 388Right-handed alpha
Helix 7
7
A
397 406Right-handed alpha
Helix 8
8
A
425 429Right-handed alpha
Helix 9
9
A
432 447Right-handed alpha
Helix 10
10
A
480 492Right-handed alpha
Helix 11
11
A
492 497Right-handed alpha
Helix 12
12
A
501 506Right-handed alpha
Helix 13
13
A
513 527Right-handed alpha
Helix 14
14
A
539 544Right-handed 310
Helix 15
15
A
545 553Right-handed alpha
Helix 16
16
A
554 560Right-handed 310
Helix 17
17
A
561 574Right-handed alpha
Helix 18
18
A
608 629Right-handed alpha
Helix 19
19
A
633 637Right-handed 310
Helix 20
20
A
641 660Right-handed alpha
Helix 21
21
A
676 682Right-handed 310
Helix 22
22
A
683 689Right-handed alpha
Helix 23
23
A
707 711Right-handed 310
Helix 24
24
A
735 745Right-handed alpha
Helix 25
25
A
753 771Right-handed alpha
Helix 26
26
A
774 787Right-handed alpha
Helix 27
27
A
813 823Right-handed alpha
Helix 28
28
A
837 841Right-handed 310
Helix 29
29
A
845 852Right-handed alpha
Helix 30
30
A
858 867Right-handed alpha
Helix 31
31
A
867 880Right-handed alpha
Helix 32
32
B
279 290Right-handed alpha
Helix 33
33
B
324 331Right-handed alpha
Helix 34
34
B
332 336Right-handed 310
Helix 35
35
B
337 342Right-handed alpha
Helix 36
36
B
349 361Right-handed alpha
Helix 37
37
B
369 388Right-handed alpha
Helix 38
38
B
397 406Right-handed alpha
Helix 39
39
B
425 429Right-handed alpha
Helix 40
40
B
430 447Right-handed alpha
Helix 41
41
B
480 492Right-handed alpha
Helix 42
42
B
492 497Right-handed alpha
Helix 43
43
B
501 506Right-handed alpha
Helix 44
44
B
513 527Right-handed alpha
Helix 45
45
B
539 544Right-handed 310
Helix 46
46
B
545 553Right-handed alpha
Helix 47
47
B
554 559Right-handed 310
Helix 48
48
B
560 574Right-handed alpha
Helix 49
49
B
608 629Right-handed alpha
Helix 50
50
B
633 637Right-handed 310
Helix 51
51
B
641 660Right-handed alpha
Helix 52
52
B
676 682Right-handed 310
Helix 53
53
B
683 689Right-handed alpha
Helix 54
54
B
707 711Right-handed 310
Helix 55
55
B
735 744Right-handed alpha
Helix 56
56
B
753 771Right-handed alpha
Helix 57
57
B
774 787Right-handed alpha
Helix 58
58
B
813 823Right-handed alpha
Helix 59
59
B
837 841Right-handed 310
Helix 60
60
B
845 852Right-handed alpha
Helix 61
61
B
858 867Right-handed alpha
Helix 62
62
B
867 880Right-handed alpha
Helix 63
63
C
279 290Right-handed alpha
Helix 64
64
C
324 331Right-handed alpha
Helix 65
65
C
332 336Right-handed 310
Helix 66
66
C
337 342Right-handed alpha
Helix 67
67
C
349 361Right-handed alpha
Helix 68
68
C
369 388Right-handed alpha
Helix 69
69
C
397 406Right-handed alpha
Helix 70
70
C
430 447Right-handed alpha
Helix 71
71
C
480 492Right-handed alpha
Helix 72
72
C
492 497Right-handed alpha
Helix 73
73
C
501 506Right-handed alpha
Helix 74
74
C
513 527Right-handed alpha
Helix 75
75
C
539 544Right-handed 310
Helix 76
76
C
545 553Right-handed alpha
Helix 77
77
C
554 559Right-handed 310
Helix 78
78
C
561 574Right-handed alpha
Helix 79
79
C
608 629Right-handed alpha
Helix 80
80
C
633 637Right-handed 310
Helix 81
81
C
641 660Right-handed alpha
Helix 82
82
C
676 681Right-handed 310
Helix 83
83
C
683 689Right-handed alpha
Helix 84
84
C
707 711Right-handed 310
Helix 85
85
C
735 744Right-handed alpha
Helix 86
86
C
753 771Right-handed alpha
Helix 87
87
C
774 787Right-handed alpha
Helix 88
88
C
813 823Right-handed alpha
Helix 89
89
C
837 841Right-handed 310
Helix 90
90
C
845 852Right-handed alpha
Helix 91
91
C
858 867Right-handed alpha
Helix 92
92
C
867 880Right-handed alpha
Helix 93
93
D
279 290Right-handed alpha
Helix 94
94
D
324 331Right-handed alpha
Helix 95
95
D
332 336Right-handed 310
Helix 96
96
D
337 342Right-handed alpha
Helix 97
97
D
349 361Right-handed alpha
Helix 98
98
D
369 388Right-handed alpha
Helix 99
99
D
397 406Right-handed alpha
Helix 100
100
D
432 447Right-handed alpha
Helix 101
101
D
481 492Right-handed alpha
Helix 102
102
D
492 497Right-handed alpha
Helix 103
103
D
501 506Right-handed alpha
Helix 104
104
D
513 527Right-handed alpha
Helix 105
105
D
539 544Right-handed 310
Helix 106
106
D
545 553Right-handed alpha
Helix 107
107
D
554 559Right-handed 310
Helix 108
108
D
560 575Right-handed alpha
Helix 109
109
D
608 629Right-handed alpha
Helix 110
110
D
633 637Right-handed 310
Helix 111
111
D
641 660Right-handed alpha
Helix 112
112
D
676 682Right-handed 310
Helix 113
113
D
683 689Right-handed alpha
Helix 114
114
D
707 711Right-handed 310
Helix 115
115
D
735 744Right-handed alpha
Helix 116
116
D
753 771Right-handed alpha
Helix 117
117
D
774 787Right-handed alpha
Helix 118
118
D
813 823Right-handed alpha
Helix 119
119
D
837 841Right-handed 310
Helix 120
120
D
845 852Right-handed alpha
Helix 121
121
D
858 867Right-handed alpha
Helix 122
122
D
867 880Right-handed alpha
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There are 13 sheets in PDB entry 4MTP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 312first strand
Strand 2
A
590 598anti-parallel
Strand 3
A
578 586anti-parallel
Strand 4
A
454 460parallel
Strand 5
A
346 347anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 312first strand
Strand 2
A
590 598anti-parallel
Strand 3
A
578 586anti-parallel
Strand 4
A
454 460parallel
Strand 5
A
474 478anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
663 666first strand
Strand 2
A
669 672anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 722first strand
Strand 2
A
728 733anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 312first strand
Strand 2
B
590 598anti-parallel
Strand 3
B
578 586anti-parallel
Strand 4
B
454 460parallel
Strand 5
B
474 479anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
663 666first strand
Strand 2
B
669 672anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
717 722first strand
Strand 2
B
728 733anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
306 312first strand
Strand 2
C
590 598anti-parallel
Strand 3
C
578 586anti-parallel
Strand 4
C
454 460parallel
Strand 5
C
474 479anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
663 666first strand
Strand 2
C
669 672anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
717 722first strand
Strand 2
C
728 733anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
584 586first strand
Strand 2
D
590 592anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
663 666first strand
Strand 2
D
669 672anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
717 722first strand
Strand 2
D
728 733anti-parallel
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