Analysis of interatomic Contacts of Structural Units in PDB entry:
4MU9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MU9 entry

There are 2 chains in PDB entry 4MU9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 0LYS 387
B
GLY 0LYS 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4MU9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
27 43Right-handed alpha
Helix 2
2
A
78 97Right-handed alpha
Helix 3
3
A
98 108Right-handed alpha
Helix 4
4
A
108 115Right-handed alpha
Helix 5
5
A
130 134Right-handed 310
Helix 6
6
A
139 158Right-handed alpha
Helix 7
7
A
159 175Right-handed alpha
Helix 8
8
A
179 183Right-handed 310
Helix 9
9
A
197 215Right-handed alpha
Helix 10
10
A
216 235Right-handed alpha
Helix 11
11
A
257 276Right-handed alpha
Helix 12
12
A
277 295Right-handed alpha
Helix 13
13
A
312 331Right-handed alpha
Helix 14
14
A
333 350Right-handed alpha
Helix 15
15
A
372 385Right-handed alpha
Helix 16
16
B
27 43Right-handed alpha
Helix 17
17
B
78 97Right-handed alpha
Helix 18
18
B
98 108Right-handed alpha
Helix 19
19
B
108 114Right-handed alpha
Helix 20
20
B
130 134Right-handed 310
Helix 21
21
B
139 158Right-handed alpha
Helix 22
22
B
159 175Right-handed alpha
Helix 23
23
B
179 183Right-handed 310
Helix 24
24
B
197 215Right-handed alpha
Helix 25
25
B
216 235Right-handed alpha
Helix 26
26
B
257 276Right-handed alpha
Helix 27
27
B
277 295Right-handed alpha
Helix 28
28
B
312 331Right-handed alpha
Helix 29
29
B
333 350Right-handed alpha
Helix 30
30
B
372 385Right-handed alpha
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There are 8 sheets in PDB entry 4MU9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
52 53first strand
Strand 2
A
370 371anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
117 118first strand
Strand 2
A
125 126anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
194 196first strand
Strand 2
A
245 247anti-parallel
Strand 3
A
252 253anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
296 299first strand
Strand 2
A
307 309anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
52 53first strand
Strand 2
B
370 371anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
117 118first strand
Strand 2
B
125 126anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
186 188first strand
Strand 2
B
191 196anti-parallel
Strand 3
B
245 247anti-parallel
Strand 4
B
252 253anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
296 299first strand
Strand 2
B
307 309anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il