Analysis of interatomic Contacts of Structural Units in PDB entry:
4MUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MUX entry

There are 2 chains in PDB entry 4MUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 309
B
 MET 1VAL 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4MUX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 30Right-handed alpha
Helix 2
2
A
42 52Right-handed alpha
Helix 3
3
A
59 63Right-handed 310
Helix 4
4
A
77 87Right-handed alpha
Helix 5
5
A
96 112Right-handed alpha
Helix 6
6
A
124 132Right-handed alpha
Helix 7
7
A
146 152Right-handed alpha
Helix 8
8
A
170 185Right-handed alpha
Helix 9
9
A
197 214Right-handed alpha
Helix 10
10
A
225 238Right-handed alpha
Helix 11
11
A
247 251Right-handed 310
Helix 12
12
A
252 256Right-handed 310
Helix 13
13
A
271 285Right-handed alpha
Helix 14
14
A
305 309Right-handed 310
Helix 15
15
B
12 30Right-handed alpha
Helix 16
16
B
42 52Right-handed alpha
Helix 17
17
B
59 63Right-handed 310
Helix 18
18
B
77 87Right-handed alpha
Helix 19
19
B
96 112Right-handed alpha
Helix 20
20
B
124 132Right-handed alpha
Helix 21
21
B
146 153Right-handed alpha
Helix 22
22
B
170 185Right-handed alpha
Helix 23
23
B
197 214Right-handed alpha
Helix 24
24
B
225 238Right-handed alpha
Helix 25
25
B
247 251Right-handed 310
Helix 26
26
B
252 257Right-handed 310
Helix 27
27
B
271 285Right-handed alpha
Helix 28
28
B
305 309Right-handed 310
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There are 7 sheets in PDB entry 4MUX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 245first strand
Strand 2
A
216 220parallel
Strand 3
A
261 266parallel
Strand 4
A
2 5parallel
Strand 5
A
290 292parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
33 36parallel
Strand 3
A
68 71parallel
Strand 4
A
90 93parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
115 119parallel
Strand 3
A
161 165parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 302first strand
Strand 2
B
300 302anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 245first strand
Strand 2
B
216 220parallel
Strand 3
B
261 266parallel
Strand 4
B
2 5parallel
Strand 5
B
290 292parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 57first strand
Strand 2
B
33 36parallel
Strand 3
B
68 71parallel
Strand 4
B
90 93parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 144first strand
Strand 2
B
115 119parallel
Strand 3
B
161 165parallel
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