Analysis of interatomic Contacts of Structural Units in PDB entry:
4MVF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MVF entry

There is 1 chain in PDB entry 4MVF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 60HIS 514
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4MVF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 71Right-handed alpha
Helix 2
2
A
107 122Right-handed alpha
Helix 3
3
A
155 162Right-handed alpha
Helix 4
4
A
165 186Right-handed alpha
Helix 5
5
A
194 196Right-handed 310
Helix 6
6
A
245 264Right-handed alpha
Helix 7
7
A
296 307Right-handed alpha
Helix 8
8
A
310 314Right-handed 310
Helix 9
9
A
316 322Right-handed alpha
Helix 10
10
A
323 330Right-handed alpha
Helix 11
11
A
341 349Right-handed alpha
Helix 12
12
A
350 352Right-handed 310
Helix 13
13
A
353 368Right-handed alpha
Helix 14
14
A
372 383Right-handed alpha
Helix 15
15
A
392 403Right-handed alpha
Helix 16
16
A
408 420Right-handed alpha
Helix 17
17
A
428 436Right-handed alpha
Helix 18
18
A
437 442Right-handed alpha
Helix 19
19
A
443 455Right-handed alpha
Helix 20
20
A
463 471Right-handed alpha
Helix 21
21
A
480 493Right-handed alpha
Helix 22
22
A
502 511Right-handed alpha
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There are 5 sheets in PDB entry 4MVF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
132 137parallel
Strand 3
A
141 147anti-parallel
Strand 4
A
97 104anti-parallel
Strand 5
A
85 91anti-parallel
Strand 6
A
72 80anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
218 219anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
209 211anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
425 427anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 462first strand
Strand 2
A
500 501anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il