Analysis of interatomic Contacts of Structural Units in PDB entry:
4MXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MXE entry

There are 2 chains in PDB entry 4MXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 648GLY 836
B
 LEU 648GLY 836
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 4MXE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
675 690Right-handed alpha
Helix 2
2
A
776 779Right-handed 310
Helix 3
3
A
782 795Right-handed alpha
Helix 4
4
A
812 824Right-handed alpha
Helix 5
5
B
675 690Right-handed alpha
Helix 6
6
B
776 779Right-handed 310
Helix 7
7
B
782 793Right-handed alpha
Helix 8
8
B
802 804Right-handed 310
Helix 9
9
B
812 824Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4MXE.

There are 18 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
658 661first strand
Strand 2
A
665 670anti-parallel
Strand 3
A
707 713anti-parallel
Strand 4
A
718 726anti-parallel
Strand 5
A
767 774anti-parallel
Strand 6
A
806 809parallel
Strand 7
A
827 831parallel
Strand 8
A
729 739anti-parallel
Strand 9
A
752 764anti-parallel
Strand 10
B
747 764anti-parallel
Strand 11
B
729 744anti-parallel
Strand 12
B
827 831anti-parallel
Strand 13
B
806 809parallel
Strand 14
B
767 774parallel
Strand 15
B
718 726anti-parallel
Strand 16
B
706 713anti-parallel
Strand 17
B
665 670anti-parallel
Strand 18
B
657 662anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il