Analysis of interatomic Contacts of Structural Units in PDB entry:
4MYS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MYS entry

There are 3 chains in PDB entry 4MYS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 252
B
 MET 1PHE 252
C
 ILE 2PHE 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 4MYS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 35Right-handed alpha
Helix 2
2
A
50 54Right-handed 310
Helix 3
3
A
60 75Right-handed alpha
Helix 4
4
A
86 99Right-handed alpha
Helix 5
5
A
117 138Right-handed alpha
Helix 6
6
A
139 148Right-handed alpha
Helix 7
7
A
149 154Right-handed 310
Helix 8
8
A
157 169Right-handed alpha
Helix 9
9
A
172 183Right-handed alpha
Helix 10
10
A
184 188Right-handed 310
Helix 11
11
A
191 197Right-handed alpha
Helix 12
12
A
210 220Right-handed alpha
Helix 13
13
A
233 238Right-handed alpha
Helix 14
14
A
238 251Right-handed alpha
Helix 15
15
B
30 35Right-handed alpha
Helix 16
16
B
50 54Right-handed 310
Helix 17
17
B
60 75Right-handed alpha
Helix 18
18
B
86 99Right-handed alpha
Helix 19
19
B
117 138Right-handed alpha
Helix 20
20
B
139 148Right-handed alpha
Helix 21
21
B
149 154Right-handed 310
Helix 22
22
B
157 169Right-handed alpha
Helix 23
23
B
172 183Right-handed alpha
Helix 24
24
B
184 188Right-handed 310
Helix 25
25
B
191 197Right-handed alpha
Helix 26
26
B
210 221Right-handed alpha
Helix 27
27
B
233 238Right-handed alpha
Helix 28
28
B
238 251Right-handed alpha
Helix 29
29
C
30 35Right-handed alpha
Helix 30
30
C
50 54Right-handed 310
Helix 31
31
C
60 75Right-handed alpha
Helix 32
32
C
86 99Right-handed alpha
Helix 33
33
C
117 124Right-handed alpha
Helix 34
34
C
129 138Right-handed alpha
Helix 35
35
C
139 148Right-handed alpha
Helix 36
36
C
149 154Right-handed 310
Helix 37
37
C
157 169Right-handed alpha
Helix 38
38
C
172 183Right-handed alpha
Helix 39
39
C
184 188Right-handed 310
Helix 40
40
C
191 197Right-handed alpha
Helix 41
41
C
210 219Right-handed alpha
Helix 42
42
C
233 238Right-handed alpha
Helix 43
43
C
238 252Right-handed alpha
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There are 3 sheets in PDB entry 4MYS. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
16 20parallel
Strand 4
A
80 85parallel
Strand 5
A
103 109parallel
Strand 6
A
201 207parallel
Strand 7
A
223 227parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
41 45anti-parallel
Strand 3
B
16 20parallel
Strand 4
B
80 85parallel
Strand 5
B
103 109parallel
Strand 6
B
201 207parallel
Strand 7
B
223 227parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 8first strand
Strand 2
C
41 45anti-parallel
Strand 3
C
16 20parallel
Strand 4
C
80 85parallel
Strand 5
C
103 109parallel
Strand 6
C
202 207parallel
Strand 7
C
224 227parallel
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