Analysis of interatomic Contacts of Structural Units in PDB entry:
4MZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MZ1 entry

There are 3 chains in PDB entry 4MZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0VAL 482
B
 ALA 0VAL 482
C
 MET 1VAL 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 4MZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 11Right-handed 310
Helix 2
2
A
23 27Right-handed 310
Helix 3
3
A
53 63Right-handed alpha
Helix 4
4
A
74 87Right-handed alpha
Helix 5
5
A
226 236Right-handed alpha
Helix 6
6
A
250 264Right-handed alpha
Helix 7
7
A
276 287Right-handed alpha
Helix 8
8
A
302 308Right-handed alpha
Helix 9
9
A
312 326Right-handed alpha
Helix 10
10
A
339 349Right-handed alpha
Helix 11
11
A
357 362Right-handed alpha
Helix 12
12
A
386 391Right-handed alpha
Helix 13
13
A
422 442Right-handed alpha
Helix 14
14
A
445 453Right-handed alpha
Helix 15
15
A
459 467Right-handed alpha
Helix 16
16
B
9 11Right-handed 310
Helix 17
17
B
23 27Right-handed 310
Helix 18
18
B
53 64Right-handed alpha
Helix 19
19
B
74 87Right-handed alpha
Helix 20
20
B
226 236Right-handed alpha
Helix 21
21
B
250 264Right-handed alpha
Helix 22
22
B
276 287Right-handed alpha
Helix 23
23
B
302 307Right-handed alpha
Helix 24
24
B
312 326Right-handed alpha
Helix 25
25
B
339 349Right-handed alpha
Helix 26
26
B
357 362Right-handed alpha
Helix 27
27
B
422 442Right-handed alpha
Helix 28
28
B
445 453Right-handed alpha
Helix 29
29
B
459 467Right-handed alpha
Helix 30
30
C
9 11Right-handed 310
Helix 31
31
C
53 63Right-handed alpha
Helix 32
32
C
74 87Right-handed alpha
Helix 33
33
C
226 237Right-handed alpha
Helix 34
34
C
250 264Right-handed alpha
Helix 35
35
C
276 287Right-handed alpha
Helix 36
36
C
302 308Right-handed alpha
Helix 37
37
C
312 325Right-handed alpha
Helix 38
38
C
326 328Right-handed 310
Helix 39
39
C
339 349Right-handed alpha
Helix 40
40
C
357 362Right-handed alpha
Helix 41
41
C
387 391Right-handed 310
Helix 42
42
C
422 442Right-handed alpha
Helix 43
43
C
445 453Right-handed alpha
Helix 44
44
C
459 467Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4MZ1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
455 457anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
66 69parallel
Strand 3
A
219 222parallel
Strand 4
A
240 244parallel
Strand 5
A
269 274parallel
Strand 6
A
290 293parallel
Strand 7
A
331 334parallel
Strand 8
A
353 356parallel
Strand 9
A
43 45parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 373first strand
Strand 2
A
376 382anti-parallel
Strand 3
A
414 418anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
455 457anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
66 69parallel
Strand 3
B
219 222parallel
Strand 4
B
240 244parallel
Strand 5
B
268 274parallel
Strand 6
B
290 293parallel
Strand 7
B
331 334parallel
Strand 8
B
353 356parallel
Strand 9
B
43 45parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 373first strand
Strand 2
B
376 382anti-parallel
Strand 3
B
414 418anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 15first strand
Strand 2
C
455 457anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 32first strand
Strand 2
C
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 45first strand
Strand 2
C
66 69parallel
Strand 3
C
219 222parallel
Strand 4
C
240 244parallel
Strand 5
C
269 274parallel
Strand 6
C
290 293parallel
Strand 7
C
331 334parallel
Strand 8
C
353 356parallel
Strand 9
C
43 45parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 373first strand
Strand 2
C
376 382anti-parallel
Strand 3
C
414 418anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il