Analysis of interatomic Contacts of Structural Units in PDB entry:
4MZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MZ8 entry

There are 4 chains in PDB entry 4MZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 482
B
 MET 1ASN 483
C
 LYS 5VAL 482
D
 LYS 2LYS 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 4MZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 11Right-handed 310
Helix 2
2
A
23 27Right-handed 310
Helix 3
3
A
53 63Right-handed alpha
Helix 4
4
A
74 88Right-handed alpha
Helix 5
5
A
226 236Right-handed alpha
Helix 6
6
A
250 264Right-handed alpha
Helix 7
7
A
276 287Right-handed alpha
Helix 8
8
A
302 308Right-handed alpha
Helix 9
9
A
312 325Right-handed alpha
Helix 10
10
A
326 328Right-handed 310
Helix 11
11
A
339 350Right-handed alpha
Helix 12
12
A
386 391Right-handed alpha
Helix 13
13
A
422 442Right-handed alpha
Helix 14
14
A
445 453Right-handed alpha
Helix 15
15
A
459 467Right-handed alpha
Helix 16
16
B
9 11Right-handed 310
Helix 17
17
B
53 63Right-handed alpha
Helix 18
18
B
74 87Right-handed alpha
Helix 19
19
B
226 236Right-handed alpha
Helix 20
20
B
250 264Right-handed alpha
Helix 21
21
B
276 287Right-handed alpha
Helix 22
22
B
302 308Right-handed alpha
Helix 23
23
B
312 326Right-handed alpha
Helix 24
24
B
339 350Right-handed alpha
Helix 25
25
B
386 391Right-handed alpha
Helix 26
26
B
422 442Right-handed alpha
Helix 27
27
B
445 453Right-handed alpha
Helix 28
28
B
459 467Right-handed alpha
Helix 29
29
C
9 11Right-handed 310
Helix 30
30
C
53 63Right-handed alpha
Helix 31
31
C
74 87Right-handed alpha
Helix 32
32
C
226 235Right-handed alpha
Helix 33
33
C
250 264Right-handed alpha
Helix 34
34
C
276 285Right-handed alpha
Helix 35
35
C
302 307Right-handed alpha
Helix 36
36
C
312 325Right-handed alpha
Helix 37
37
C
339 350Right-handed alpha
Helix 38
38
C
357 362Right-handed alpha
Helix 39
39
C
386 391Right-handed alpha
Helix 40
40
C
422 442Right-handed alpha
Helix 41
41
C
445 453Right-handed alpha
Helix 42
42
C
459 467Right-handed alpha
Helix 43
43
D
9 11Right-handed 310
Helix 44
44
D
53 63Right-handed alpha
Helix 45
45
D
74 88Right-handed alpha
Helix 46
46
D
226 236Right-handed alpha
Helix 47
47
D
250 264Right-handed alpha
Helix 48
48
D
276 286Right-handed alpha
Helix 49
49
D
302 307Right-handed alpha
Helix 50
50
D
312 323Right-handed alpha
Helix 51
51
D
324 328Right-handed 310
Helix 52
52
D
339 350Right-handed alpha
Helix 53
53
D
357 362Right-handed alpha
Helix 54
54
D
386 391Right-handed alpha
Helix 55
55
D
422 442Right-handed alpha
Helix 56
56
D
445 453Right-handed alpha
Helix 57
57
D
459 467Right-handed alpha
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There are 16 sheets in PDB entry 4MZ8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
B
455 458parallel
Strand 3
B
13 15anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
455 457anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
38 39anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
66 69parallel
Strand 3
A
219 222parallel
Strand 4
A
240 244parallel
Strand 5
A
268 274parallel
Strand 6
A
290 293parallel
Strand 7
A
331 334parallel
Strand 8
A
353 356parallel
Strand 9
A
43 45parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 373first strand
Strand 2
A
376 382anti-parallel
Strand 3
A
414 418anti-parallel
Strand 4
B
472 475anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
38 39anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
66 69parallel
Strand 3
B
219 222parallel
Strand 4
B
240 244parallel
Strand 5
B
268 274parallel
Strand 6
B
290 293parallel
Strand 7
B
331 334parallel
Strand 8
B
353 356parallel
Strand 9
B
43 45parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 373first strand
Strand 2
B
376 382anti-parallel
Strand 3
B
414 418anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 16first strand
Strand 2
C
454 457anti-parallel
Strand 3
D
3 6parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 32first strand
Strand 2
C
38 39anti-parallel
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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 45first strand
Strand 2
C
66 69parallel
Strand 3
C
219 222parallel
Strand 4
C
240 244parallel
Strand 5
C
268 274parallel
Strand 6
C
290 293parallel
Strand 7
C
331 334parallel
Strand 8
C
353 356parallel
Strand 9
C
43 45parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 373first strand
Strand 2
C
376 382anti-parallel
Strand 3
C
414 418anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
472 475first strand
Strand 2
D
414 418anti-parallel
Strand 3
D
376 382anti-parallel
Strand 4
D
371 373anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
13 15first strand
Strand 2
D
455 457anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 32first strand
Strand 2
D
38 39anti-parallel
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There are 9 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 45first strand
Strand 2
D
66 69parallel
Strand 3
D
219 222parallel
Strand 4
D
240 244parallel
Strand 5
D
269 274parallel
Strand 6
D
290 293parallel
Strand 7
D
331 334parallel
Strand 8
D
353 356parallel
Strand 9
D
43 45parallel
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