Analysis of interatomic Contacts of Structural Units in PDB entry:
4MZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4MZW entry

There are 2 chains in PDB entry 4MZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -14LYS 262
B
 THR 2LYS 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 4MZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
49 65Right-handed alpha
Helix 3
3
A
82 85Right-handed 310
Helix 4
4
A
86 93Right-handed alpha
Helix 5
5
A
114 127Right-handed alpha
Helix 6
6
A
133 156Right-handed alpha
Helix 7
7
A
157 164Right-handed alpha
Helix 8
8
A
169 194Right-handed alpha
Helix 9
9
A
203 218Right-handed alpha
Helix 10
10
A
224 229Right-handed alpha
Helix 11
11
A
230 233Right-handed 310
Helix 12
12
A
234 246Right-handed alpha
Helix 13
13
A
247 256Right-handed alpha
Helix 14
14
B
16 20Right-handed 310
Helix 15
15
B
49 65Right-handed alpha
Helix 16
16
B
82 85Right-handed 310
Helix 17
17
B
86 93Right-handed alpha
Helix 18
18
B
114 127Right-handed alpha
Helix 19
19
B
133 157Right-handed alpha
Helix 20
20
B
157 164Right-handed alpha
Helix 21
21
B
169 194Right-handed alpha
Helix 22
22
B
203 218Right-handed alpha
Helix 23
23
B
224 229Right-handed alpha
Helix 24
24
B
230 233Right-handed 310
Helix 25
25
B
234 246Right-handed alpha
Helix 26
26
B
247 256Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4MZW. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
42 46parallel
Strand 3
A
100 103anti-parallel
Strand 4
A
110 113anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
42 46parallel
Strand 3
B
100 103anti-parallel
Strand 4
B
110 113anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il