Analysis of interatomic Contacts of Structural Units in PDB entry:
4N0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N0P entry

There are 8 chains in PDB entry 4N0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -7ALA 249
B
 TYR -3ASP 250
C
 HIS -7TYR 248
D
 ASN -5ALA 249
E
 ARG 126TYR 248
F
 HIS -7ALA 249
G
 GLU -6TYR 248
H
 PRO 125TYR 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 48 helices in PDB entry 4N0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
135 147Right-handed alpha
Helix 2
2
A
148 152Right-handed 310
Helix 3
3
A
161 170Right-handed alpha
Helix 4
4
A
186 199Right-handed alpha
Helix 5
5
A
215 225Right-handed alpha
Helix 6
6
A
236 249Right-handed alpha
Helix 7
7
B
135 148Right-handed alpha
Helix 8
8
B
149 152Right-handed 310
Helix 9
9
B
161 170Right-handed alpha
Helix 10
10
B
186 200Right-handed alpha
Helix 11
11
B
215 225Right-handed alpha
Helix 12
12
B
236 249Right-handed alpha
Helix 13
13
C
135 147Right-handed alpha
Helix 14
14
C
148 152Right-handed 310
Helix 15
15
C
161 170Right-handed alpha
Helix 16
16
C
186 199Right-handed alpha
Helix 17
17
C
215 225Right-handed alpha
Helix 18
18
C
236 248Right-handed alpha
Helix 19
19
D
135 148Right-handed alpha
Helix 20
20
D
149 152Right-handed 310
Helix 21
21
D
161 170Right-handed alpha
Helix 22
22
D
186 200Right-handed alpha
Helix 23
23
D
215 225Right-handed alpha
Helix 24
24
D
236 249Right-handed alpha
Helix 25
25
E
135 147Right-handed alpha
Helix 26
26
E
148 152Right-handed 310
Helix 27
27
E
161 170Right-handed alpha
Helix 28
28
E
186 199Right-handed alpha
Helix 29
29
E
215 225Right-handed alpha
Helix 30
30
E
236 248Right-handed alpha
Helix 31
31
F
135 147Right-handed alpha
Helix 32
32
F
148 152Right-handed 310
Helix 33
33
F
161 170Right-handed alpha
Helix 34
34
F
185 199Right-handed alpha
Helix 35
35
F
215 225Right-handed alpha
Helix 36
36
F
236 249Right-handed alpha
Helix 37
37
G
135 147Right-handed alpha
Helix 38
38
G
148 152Right-handed 310
Helix 39
39
G
161 170Right-handed alpha
Helix 40
40
G
186 199Right-handed alpha
Helix 41
41
G
215 225Right-handed alpha
Helix 42
42
G
236 248Right-handed alpha
Helix 43
43
H
135 147Right-handed alpha
Helix 44
44
H
148 152Right-handed 310
Helix 45
45
H
161 170Right-handed alpha
Helix 46
46
H
186 199Right-handed alpha
Helix 47
47
H
215 225Right-handed alpha
Helix 48
48
H
236 248Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 4N0P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 159first strand
Strand 2
A
128 132parallel
Strand 3
A
178 181parallel
Strand 4
A
206 211parallel
Strand 5
A
229 232parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 160first strand
Strand 2
B
127 133parallel
Strand 3
B
178 182parallel
Strand 4
B
206 211parallel
Strand 5
B
229 232parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 160first strand
Strand 2
C
128 133parallel
Strand 3
C
178 181parallel
Strand 4
C
206 210parallel
Strand 5
C
229 231parallel
Back to list of sheets
Back to top of page

There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
229 232first strand
Strand 2
D
206 211parallel
Strand 3
D
178 182parallel
Strand 4
D
127 133parallel
Strand 5
D
154 160parallel
Strand 6
H
155 160parallel
Strand 7
H
128 133parallel
Strand 8
H
178 182parallel
Strand 9
H
206 211parallel
Strand 10
H
229 232parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
154 160first strand
Strand 2
E
127 133parallel
Strand 3
E
178 182parallel
Strand 4
E
206 211parallel
Strand 5
E
229 232parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
155 160first strand
Strand 2
F
128 133parallel
Strand 3
F
178 182parallel
Strand 4
F
206 211parallel
Strand 5
F
229 232parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
155 160first strand
Strand 2
G
128 133parallel
Strand 3
G
178 182parallel
Strand 4
G
206 210parallel
Strand 5
G
229 231parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il